RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MT-ND4P03905 459 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 UBBP0CG47 229 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 HSPA13P48723 471 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 RAB7AP51149 207 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 NSUN5P1Q3KNT7 163 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 C9orf152Q5JTZ5 239 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 NKAPLQ5M9Q1 402 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 C6orf183Q5T699 404 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 SYT6Q5T7P8 510 aaPredicted RBP10.15□□□□□ -0.78
SGCE-203ENST00000425444 Q6ZS46 218 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 SLC16A12Q6ZSM3 486 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 LYG1Q8N1E2 194 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 PRR18Q8N4B5 295 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 TMEM104Q8NE00 496 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 OR4K15Q8NH41 348 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 OR56B4Q8NH76 319 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 CFHR4Q92496 578 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 CNBD2Q96M20 576 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 Q96M66 194 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 RBM14Q96PK6 669 aaKnown RBP10.15□□□□□ -0.78
SGCE-203ENST00000425444 RAB9BQ9NP90 201 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 CSMD3Q7Z407 3707 aa10.15□□□□□ -0.78
SGCE-203ENST00000425444 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 UBE2QL1A1L167 161 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A10PA6NDY2 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A18PA6NE21 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A16PA6NEW6 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A20PA6NIJ5 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A7PA6NKC0 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A12PA8MX19 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A5PA8MXJ8 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A23PA8MXZ1 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 C15orf65H3BRN8 121 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 HSD17B6O14756 317 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 SPINT2O43291 252 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 ORC5O43913 435 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 LPLP06858 475 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 SNRNP70P08621 437 aaKnown RBP10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A15PP0C7V4 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A13PP0C7W8 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A14PP0C7W9 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 FAM90A24PP0C7X0 464 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 CD28P10747 220 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 VHLP40337 213 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 IRF3Q14653 427 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 TRAT1Q6PIZ9 186 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 UNQ9370/PRO34162Q6UXP9 181 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 LYPD6Q86Y78 171 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 PHYHIPQ92561 330 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 TMEM203Q969S6 136 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 DUSP21Q9H596 190 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 GFOD1Q9NXC2 390 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 GNG12Q9UBI6 72 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 MOB4Q9Y3A3 225 aa10.14□□□□□ -0.79
SGCE-203ENST00000425444 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 SH2D7A6NKC9 451 aaPredicted RBP10.13□□□□□ -0.79
SGCE-203ENST00000425444 C12orf77C9JDV5 145 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 M0QZK8 103 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 CCRL2O00421 344 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 PDCD6O75340 191 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 CA11O75493 328 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 TMEM11P17152 192 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 SRMP19623 302 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 FUT3P21217 361 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 CRHBPP24387 322 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 IL3RAP26951 378 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 REG1BP48304 166 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 RPS25P62851 125 aaKnown RBP10.13□□□□□ -0.79
SGCE-203ENST00000425444 DIAPH2-AS1Q14236 149 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 TRAM1Q15629 374 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 TMEM30BQ3MIR4 351 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 PRSS48Q7RTY5 328 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 OR8H3Q8N146 312 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 OR10V1Q8NGI7 309 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 OR52M1Q8NGK5 317 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 NEDD4LQ96PU5 975 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 TMEM59Q9BXS4 323 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 BLOC1S6Q9UL45 172 aa10.13□□□□□ -0.79
SGCE-203ENST00000425444 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 ARL6IP5O75915 188 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 HBZP02008 142 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 GAPDHP04406 335 aaKnown RBP10.12□□□□□ -0.79
SGCE-203ENST00000425444 GLAP06280 429 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 UCHL1P09936 223 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 PSMA1P25786 263 aaKnown RBP10.12□□□□□ -0.79
SGCE-203ENST00000425444 HTR2CP28335 458 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 MAP2K4P45985 399 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 GP2P55259 537 aaKnown RBP10.12□□□□□ -0.79
SGCE-203ENST00000425444 MLLT11Q13015 90 aaPredicted RBP10.12□□□□□ -0.79
SGCE-203ENST00000425444 HNF4GQ14541 408 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 OR10K2Q6IF99 312 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
SGCE-203ENST00000425444 MOB3BQ86TA1 216 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 OR6M1Q8NGM8 313 aa10.12□□□□□ -0.79
SGCE-203ENST00000425444 R3HDM4Q96D70 268 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms