RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CASTOR1Q8WTX7 329 aa7.47□□□□□ -1.21
HPS4-204ENST00000422379 ERGIC1Q969X5 290 aa7.47□□□□□ -1.21
HPS4-204ENST00000422379 DPCDQ9BVM2 203 aaPredicted RBP7.47□□□□□ -1.21
HPS4-204ENST00000422379 RHOFQ9HBH0 211 aa7.47□□□□□ -1.21
HPS4-204ENST00000422379 FLNBO75369 2602 aaKnown RBP7.47□□□□□ -1.21
HPS4-204ENST00000422379 TRAV39A0A0B4J263 110 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 MEX3AA1L020 520 aaKnown RBP7.46□□□□□ -1.21
HPS4-204ENST00000422379 DEGS1O15121 323 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 RGS11O94810 467 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 DUS4LO95620 317 aaKnown RBP7.46□□□□□ -1.21
HPS4-204ENST00000422379 IGHV4-39P01824 125 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 ZNF44P15621 663 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 CXCL2P19875 107 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 LMO1P25800 156 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 ATXN7L3Q14CW9 347 aaPredicted RBP7.46□□□□□ -1.21
HPS4-204ENST00000422379 TMEM128Q5BJH2 165 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 SPIN3Q5JUX0 258 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 LPCAT3Q6P1A2 487 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 LYPD2Q6UXB3 125 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 ZNRF1Q8ND25 227 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 TMEM185AQ8NFB2 350 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 ASB13Q8WXK3 278 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 COQ2Q96H96 371 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 GAFA1Q96PS6 74 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 PHB2Q99623 299 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 RTBDNQ9BSG5 229 aaPredicted RBP7.46□□□□□ -1.21
HPS4-204ENST00000422379 C12orf4Q9NQ89 552 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 RASL12Q9NYN1 266 aa7.46□□□□□ -1.21
HPS4-204ENST00000422379 CCDC168Q8NDH2 2452 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 OOEPA6NGQ2 149 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 MPC2O95563 127 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 DAOP14920 347 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 HLA-GP17693 338 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 SUPT4H1P63272 117 aaKnown RBP7.46□□□□□ -1.22
HPS4-204ENST00000422379 GRK1Q15835 563 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 ZNF660Q6AZW8 331 aaPredicted RBP7.46□□□□□ -1.22
HPS4-204ENST00000422379 ZNF767PQ75MW2 155 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 TPRX1Q8N7U7 411 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 OR8H1Q8NGG4 311 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 CCL13Q99616 98 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 ZNF2Q9BSG1 426 aaPredicted RBP7.46□□□□□ -1.22
HPS4-204ENST00000422379 CTSZQ9UBR2 303 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 DNAJB11Q9UBS4 358 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 ARID1AO14497 2285 aa7.46□□□□□ -1.22
HPS4-204ENST00000422379 FXYD6-FXYD2A0A087WZ82 144 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 TRAV14DV4A0A0A6YYC5 116 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 DBX1A6NMT0 343 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 MCRIP1C9JLW8 97 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 LGALS8O00214 317 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 SH2D1BO14796 132 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 ARPC5O15511 151 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 SFT2D2O95562 160 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 NAPSAO96009 420 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 OR5H8P0DN80 308 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 NFYAP23511 347 aaPredicted RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 HTR2BP41595 481 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 GABRA2P47869 451 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 SEC61A1P61619 476 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 SRSF4Q08170 494 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 SURF2Q15527 256 aaPredicted RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 SLC9A3R2Q15599 337 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 THOC7Q6I9Y2 204 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 FIP1L1Q6UN15 594 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 TEX261Q6UWH6 196 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 ZNF788Q6ZQV5 615 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 KCTD9Q7L273 389 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 MRPL30Q8TCC3 161 aaKnown RBP7.45□□□□□ -1.22
HPS4-204ENST00000422379 C14orf79Q96F83 325 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 SDSLQ96GA7 329 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 CCL19Q99731 98 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 DCTN5Q9BTE1 182 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 FXYD6Q9H0Q3 95 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 RAB1BQ9H0U4 201 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 ZNF286AQ9HBT8 521 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 NECAP2Q9NVZ3 263 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 PRR13Q9NZ81 148 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 U3KQ87 197 aa7.45□□□□□ -1.22
HPS4-204ENST00000422379 PPIAL4EA0A075B759 164 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 HMSDA8MTL9 139 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 PPIAL4DF5H284 164 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 L7N2F9 121 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 PPIAL4FP0DN26 164 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 PGAM2P15259 253 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 RCC1P18754 421 aaPredicted RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 AESQ08117 197 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 OPCMLQ14982 345 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 HFEQ30201 348 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 ZNF497Q6ZNH5 498 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 GAPTQ8N292 157 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 ZNF680Q8NEM1 530 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms