RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ETAA1Q9NY74 926 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 ZNF581Q9P0T4 197 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 ERGIC3Q9Y282 383 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 A0A1W2PP11 408 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 A0A1W2PPK0 400 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 NCBP2LA6PVI3 153 aaKnown RBP16.92■□□□□ 0.3
PTPN4-202ENST00000420482 C15orf65H3BRN8 121 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 GLAP06280 429 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 IGLL1P15814 213 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 DIAPH2-AS1Q14236 149 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 RAB12Q6IQ22 244 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 Q6ZPA2 131 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 AHSA2Q719I0 299 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 DERL3Q96Q80 235 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 GON7Q9BXV9 100 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 PLCXD1Q9NUJ7 323 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 RCC2Q9P258 522 aaKnown RBP16.92■□□□□ 0.3
PTPN4-202ENST00000420482 GNG12Q9UBI6 72 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 GHRLQ9UBU3 117 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 PSORS1C1Q9UIG5 152 aa16.92■□□□□ 0.3
PTPN4-202ENST00000420482 MAGEA13PA6NCF6 341 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 CRTAPO75718 401 aaPredicted RBP16.91■□□□□ 0.3
PTPN4-202ENST00000420482 EBI3Q14213 229 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 SYT6Q5T7P8 510 aaPredicted RBP16.91■□□□□ 0.3
PTPN4-202ENST00000420482 FOXB2Q5VYV0 432 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 IZUMO1Q8IYV9 350 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 BPIFB6Q8NFQ5 453 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 UQCC2Q9BRT2 126 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 SELENOIQ9C0D9 397 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 CST11Q9H112 138 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 ZFP57Q9NU63 452 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 PEX16Q9Y5Y5 336 aa16.91■□□□□ 0.3
PTPN4-202ENST00000420482 IGHG2P01859 326 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 MGMTP16455 207 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 FUT3P21217 361 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 CD1BP29016 333 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 REG1BP48304 166 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 C10orf99Q6UWK7 81 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 ZNF329Q86UD4 541 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 TGIF2LXQ8IUE1 241 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 RTN4IP1Q8WWV3 396 aaPredicted RBP16.9■□□□□ 0.3
PTPN4-202ENST00000420482 DPF1Q92782 380 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 LIN7CQ9NUP9 197 aaKnown RBP16.9■□□□□ 0.3
PTPN4-202ENST00000420482 AURKAIP1Q9NWT8 199 aaPredicted RBP16.9■□□□□ 0.3
PTPN4-202ENST00000420482 KCNIP1Q9NZI2 227 aa16.9■□□□□ 0.3
PTPN4-202ENST00000420482 IGHV3-43A0A0B4J1X8 118 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 C12orf77C9JDV5 145 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 AP4M1O00189 453 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 GNAO1P09471 354 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 IGHV3-43DP0DP04 118 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 GPR50Q13585 617 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 OGFRL1Q5TC84 451 aaPredicted RBP16.89■□□□□ 0.29
PTPN4-202ENST00000420482 STEAP3Q658P3 488 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 PRR18Q8N4B5 295 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 MS4A15Q8N5U1 240 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 OR8H1Q8NGG4 311 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 OR4K15Q8NH41 348 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 UBALD1Q8TB05 177 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 EAF1Q96JC9 268 aaPredicted RBP16.89■□□□□ 0.29
PTPN4-202ENST00000420482 MND1Q9BWT6 205 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 BANF2Q9H503 90 aa16.89■□□□□ 0.29
PTPN4-202ENST00000420482 NUDT19A8MXV4 375 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 MOSP00540 346 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 UBBP0CG47 229 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 RPL23AP62750 156 aaKnown RBP16.88■□□□□ 0.29
PTPN4-202ENST00000420482 ZNF554Q86TJ5 538 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 NANOGP1Q8N7R0 232 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 RASL11BQ9BPW5 248 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 MCRIP2Q9BUT9 160 aaKnown RBP16.88■□□□□ 0.29
PTPN4-202ENST00000420482 DNAH3Q8TD57 4116 aa16.88■□□□□ 0.29
PTPN4-202ENST00000420482 IGHV3-72A0A0B4J1Y9 119 aa16.87■□□□□ 0.29
PTPN4-202ENST00000420482 CASQ2O14958 399 aaPredicted RBP16.87■□□□□ 0.29
PTPN4-202ENST00000420482 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
PTPN4-202ENST00000420482 TEX38Q6PEX7 206 aa16.87■□□□□ 0.29
PTPN4-202ENST00000420482 SLC25A48Q6ZT89 311 aaKnown RBP16.87■□□□□ 0.29
PTPN4-202ENST00000420482 STPG2Q8N412 459 aa16.87■□□□□ 0.29
PTPN4-202ENST00000420482 Q96M66 194 aa16.87■□□□□ 0.29
PTPN4-202ENST00000420482 NOL4LQ96MY1 436 aaPredicted RBP16.87■□□□□ 0.29
PTPN4-202ENST00000420482 ABCG5Q9H222 651 aa16.87■□□□□ 0.29
PTPN4-202ENST00000420482 SC5DO75845 299 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 HBZP02008 142 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 ZNF137PP52743 207 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 GLT8D1Q68CQ7 371 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 GAPTQ8N292 157 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 FBLIM1Q8WUP2 373 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 TFAP2CQ92754 450 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 ST6GALNAC6Q969X2 333 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 OR2S2Q9NQN1 319 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 SCN3BQ9NY72 215 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 LRRC42Q9Y546 428 aa16.86■□□□□ 0.29
PTPN4-202ENST00000420482 PDCD6O75340 191 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 RGS11O94810 467 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 GABPB1Q06547 395 aaPredicted RBP16.85■□□□□ 0.29
PTPN4-202ENST00000420482 OR2W3Q7Z3T1 314 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 Q8N6K4 173 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 LINC00482Q8N8I6 264 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 TMEM104Q8NE00 496 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 OR10V1Q8NGI7 309 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 NEDD4LQ96PU5 975 aa16.85■□□□□ 0.29
PTPN4-202ENST00000420482 TAF9BQ9HBM6 251 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms