RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 SYT6Q5T7P8 510 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-211ENST00000420363 C8orf31Q8N9H6 132 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 RFESDQ8TAC1 157 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 ARL11Q969Q4 196 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 URM1Q9BTM9 101 aaKnown RBP17.2■□□□□ 0.34
CPNE1-211ENST00000420363 KCNK15Q9H427 330 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 MBNL3Q9NUK0 354 aaKnown RBP17.2■□□□□ 0.34
CPNE1-211ENST00000420363 TRAPPC2LQ9UL33 140 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 PSG11Q9UQ72 335 aa17.2■□□□□ 0.34
CPNE1-211ENST00000420363 C12orf77C9JDV5 145 aa17.19■□□□□ 0.34
CPNE1-211ENST00000420363 FGF9P31371 208 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-211ENST00000420363 UTF1Q5T230 341 aa17.19■□□□□ 0.34
CPNE1-211ENST00000420363 C11orf88Q6PI97 169 aa17.19■□□□□ 0.34
CPNE1-211ENST00000420363 CCDC107Q8WV48 283 aa17.19■□□□□ 0.34
CPNE1-211ENST00000420363 SPINT2O43291 252 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 BRS3P32247 399 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 KIR2DS4P43632 304 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 LOXL3P58215 753 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 P2RY14Q15391 338 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 NKAPLQ5M9Q1 402 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 C16orf82Q7Z2V1 217 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 FAM89BQ8N5H3 189 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 LINC00311Q8N616 119 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 MRPL30Q8TCC3 161 aaKnown RBP17.18■□□□□ 0.34
CPNE1-211ENST00000420363 FAM3DQ96BQ1 224 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 NICN1Q9BSH3 213 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 LPAR5Q9H1C0 372 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 GFOD1Q9NXC2 390 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 STEAP1Q9UHE8 339 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 STUB1Q9UNE7 303 aa17.18■□□□□ 0.34
CPNE1-211ENST00000420363 A0A0A6YYD4 124 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 UBE2QL1A1L167 161 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 SDCBPO00560 298 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-211ENST00000420363 RAB13P51153 203 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 MADCAM1Q13477 382 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 LTC4SQ16873 150 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 CCBE1Q6UXH8 406 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-211ENST00000420363 OR4K15Q8NH41 348 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 TOMM40LQ969M1 308 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 RPEQ96AT9 228 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 SULT4A1Q9BR01 284 aa17.17■□□□□ 0.34
CPNE1-211ENST00000420363 SHISA3A0PJX4 238 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 LDLRAD4O15165 306 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 JUNBP17275 347 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-211ENST00000420363 MNDAP41218 407 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 GNG10P50151 68 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 SRSF4Q08170 494 aaKnown RBP17.16■□□□□ 0.34
CPNE1-211ENST00000420363 C22orf42Q6IC83 251 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 TMEM219Q86XT9 240 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 Q8N2B8 174 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 OR51D1Q8NGF3 324 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 LEAP2Q969E1 77 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 CITED1Q99966 193 aa17.16■□□□□ 0.34
CPNE1-211ENST00000420363 IFITM5A6NNB3 132 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 FOXI3A8MTJ6 420 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-211ENST00000420363 HBZP02008 142 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 RCC1P18754 421 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-211ENST00000420363 RAB3BP20337 219 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 BLVRBP30043 206 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-211ENST00000420363 RAB7AP51149 207 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 MOB1BQ7L9L4 216 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 C6orf201Q7Z4U5 140 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 OR8H3Q8N146 312 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 OR10X1Q8NGY0 326 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 OR2T6Q8NHC8 308 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 AKR1E2Q96JD6 320 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 LIN7BQ9HAP6 207 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 KCNIP1Q9NZI2 227 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 HSF4Q9ULV5 492 aa17.15■□□□□ 0.34
CPNE1-211ENST00000420363 NAPSAO96009 420 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 EFNB2P52799 333 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 CLDN12P56749 244 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 OCSTAMPQ9BR26 566 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 RIMS4Q9H426 269 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-211ENST00000420363 TAF9BQ9HBM6 251 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 PLEKHJ1Q9NW61 149 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 TXNL4BQ9NX01 149 aaKnown RBP17.14■□□□□ 0.33
CPNE1-211ENST00000420363 GNG12Q9UBI6 72 aa17.14■□□□□ 0.33
CPNE1-211ENST00000420363 TRBV6-6A0A0A6YYG2 114 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 TMEM272A0A1B0GTI8 110 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 A0A1W2PPI3 338 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 TNFAIP8O95379 198 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 IGHV3-7P01780 117 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 OR10A3P58181 314 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 ZNF816Q0VGE8 651 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-211ENST00000420363 HMGN3Q15651 99 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 C2orf76Q3KRA6 126 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 HES5Q5TA89 166 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 ZNF880Q6PDB4 577 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 ZNF439Q8NDP4 499 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 OR56B1Q8NGI3 324 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 UBALD1Q8TB05 177 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 CYYR1Q96J86 154 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 FAAP24Q9BTP7 215 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 ZNF702PQ9H963 129 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 JPT1Q9UK76 154 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 SSR3Q9UNL2 185 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 TGP01266 2768 aa17.13■□□□□ 0.33
CPNE1-211ENST00000420363 FAM90A9PA6NNJ1 464 aa17.12■□□□□ 0.33
CPNE1-211ENST00000420363 IL3RAP26951 378 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms