RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 H0YHG0 523 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 CCL24O00175 119 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 TXNL1O43396 289 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 MT-ND4P03905 459 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 RPLP1P05386 114 aaKnown RBP13.59□□□□□ -0.23
PTCD1-202ENST00000419981 GP2P55259 537 aaKnown RBP13.59□□□□□ -0.23
PTCD1-202ENST00000419981 RAB25P57735 213 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 GPR50Q13585 617 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 PNLIPRP3Q17RR3 467 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
PTCD1-202ENST00000419981 FAM53AQ6NSI3 398 aaPredicted RBP13.59□□□□□ -0.23
PTCD1-202ENST00000419981 TMEM104Q8NE00 496 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 RDH12Q96NR8 316 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 DUX3Q96PT4 197 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 RASL11BQ9BPW5 248 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 BABAM2Q9NXR7 383 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 TRAPPC2LQ9UL33 140 aa13.59□□□□□ -0.23
PTCD1-202ENST00000419981 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
PTCD1-202ENST00000419981 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 SPINT2O43291 252 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
PTCD1-202ENST00000419981 LALBAP00709 142 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 DGCR2P98153 550 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 Q499Y3 187 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 YIF1BQ5BJH7 314 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 C6orf183Q5T699 404 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 SYT6Q5T7P8 510 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-202ENST00000419981 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
PTCD1-202ENST00000419981 OR8U1Q8NH10 309 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 GHSRQ92847 366 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 S1PR3Q99500 378 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 RCC2Q9P258 522 aaKnown RBP13.58□□□□□ -0.24
PTCD1-202ENST00000419981 GNG12Q9UBI6 72 aa13.58□□□□□ -0.24
PTCD1-202ENST00000419981 MRPS28Q9Y2Q9 187 aaKnown RBP13.58□□□□□ -0.24
PTCD1-202ENST00000419981 TRAV8-7A0A075B6U6 113 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 SLC31A2O15432 143 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 GPX5O75715 221 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 FSTP19883 344 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 ZNF137PP52743 207 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 FOXE3Q13461 319 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 MED21Q13503 144 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 DMKNQ6E0U4 476 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-202ENST00000419981 LCNL1Q6ZST4 164 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 PRR18Q8N4B5 295 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 JAGN1Q8N5M9 183 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 ZNF439Q8NDP4 499 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 OR8H1Q8NGG4 311 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 OR4K15Q8NH41 348 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 MUL1Q969V5 352 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 MRPS24Q96EL2 167 aaKnown RBP13.57□□□□□ -0.24
PTCD1-202ENST00000419981 PLSCR3Q9NRY6 295 aa13.57□□□□□ -0.24
PTCD1-202ENST00000419981 CHCHD3Q9NX63 227 aaKnown RBP13.57□□□□□ -0.24
PTCD1-202ENST00000419981 ZNF736B4DX44 427 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-202ENST00000419981 RAMP3O60896 148 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 BAG2O95816 211 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 ELANEP08246 267 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 VDAC1P21796 283 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-202ENST00000419981 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTCD1-202ENST00000419981 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 AWAT2Q6E213 333 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 RAB12Q6IQ22 244 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 TRAT1Q6PIZ9 186 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 GLIPR1L1Q6UWM5 242 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 FAM71E2Q8N5Q1 922 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 ZFP41Q8N8Y5 198 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 OR10V1Q8NGI7 309 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 OR5M8Q8NGP6 311 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 TFAP2CQ92754 450 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 TMEM80Q96HE8 168 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 PGLYRP3Q96LB9 341 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 WWC2-AS2Q96NR7 200 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 CLEC2DQ9UHP7 191 aa13.56□□□□□ -0.24
PTCD1-202ENST00000419981 HBZP02008 142 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 SOX6P35712 828 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 ZNF134P52741 427 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 KIR2DS1Q14954 304 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 OR1L1Q8NH94 360 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 OR14A2Q96R54 314 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 PEX16Q9Y5Y5 336 aa13.55□□□□□ -0.24
PTCD1-202ENST00000419981 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 TRBV5-7A0A0A0MS05 114 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 IGHG4P01861 327 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 LUMP51884 338 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-202ENST00000419981 F2RL1P55085 397 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 CFHR3Q02985 330 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 CT45A1Q5HYN5 189 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 GAPTQ8N292 157 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 SETD9Q8NE22 299 aa13.54□□□□□ -0.24
PTCD1-202ENST00000419981 CT45A3Q8NHU0 189 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms