RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MGAM2Q2M2H8 2515 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 TRGV10A0A0A0MS01 117 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 TRAV24A0A0B4J272 114 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 A0A1W2PPK0 400 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ODAMA1E959 279 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ODF3BA8MYP8 253 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PTGES3LE9PB15 166 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 H0YHG0 523 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 H3BUX3 64 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 HSPB6O14558 160 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PRYO14603 147 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 DEGS1O15121 323 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PIN1P1O15428 100 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 CDRT1O95170 752 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 NDUFA7O95182 113 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ARG1P05089 322 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 CELP19835 753 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 MYF6P23409 242 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PAX6P26367 422 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PTGFRP43088 359 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 GLIPR1P48060 266 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PCP4P48539 62 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 SLC35A2P78381 396 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 BDH1Q02338 343 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 AESQ08117 197 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ATXN7L3Q14CW9 347 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 RSU1Q15404 277 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 KRBOX4Q5JUW0 171 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF626Q68DY1 528 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 DHRS7BQ6IAN0 325 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 GDPGP1Q6ZNW5 385 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 LHFPL4Q7Z7J7 247 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 Q8NFD4 153 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 OR11H6Q8NGC7 330 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 OR51T1Q8NGJ9 327 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 OR13D1Q8NGV5 346 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 OR4F5Q8NH21 305 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 OR5R1Q8NH85 324 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 MYDGFQ969H8 173 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 FYTTD1Q96QD9 318 aaKnown RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 NR1H4Q96RI1 486 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF184Q99676 751 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 CDCA4Q9BXL8 241 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 METTL9Q9H1A3 318 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PPIL3Q9H2H8 161 aaKnown RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 VCX3BQ9H321 246 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 IL36GQ9NZH8 169 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 CKLFQ9UBR5 152 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 LSM2Q9Y333 95 aaKnown RBP5.59□□□□□ -1.51
HMGN1-205ENST00000419378 MMP24Q9Y5R2 645 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 SESN1Q9Y6P5 492 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
HMGN1-205ENST00000419378 CMYA5Q8N3K9 4069 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 IGHV2-26A0A0B4J1V2 119 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 FUOMA2VDF0 154 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A8PA6NJQ4 464 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 MMP23AO75900 390 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 ATP6V1G2O95670 118 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 CSF1P09603 554 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 NHLRC4P0CG21 123 aaPredicted RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 SERPINA2P20848 420 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 MAPK3P27361 379 aaPredicted RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 TGFBR2P37173 567 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 HSPA13P48723 471 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 RBM11P57052 281 aaKnown RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 DYNC1I2Q13409 638 aaKnown RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 INSL4Q14641 139 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 IRF3Q14653 427 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 SPHARQ15513 63 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 MED22Q15528 200 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 AANATQ16613 207 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 LRRC75BQ2VPJ9 315 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 PAN3Q58A45 887 aaKnown RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 NHLRC3Q5JS37 347 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 LDLRAD2Q5SZI1 272 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 PRAMEF5Q5TYX0 476 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 BAIAP2L2Q6UXY1 529 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 HEPN1Q6WQI6 88 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 DYNAPQ8N1N2 210 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 OSR2Q8N2R0 312 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 JAGN1Q8N5M9 183 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 THRSPQ92748 146 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 OR5M11Q96RB7 305 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 S100A13Q99584 98 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 SSX3Q99909 188 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM133Q9H2Q1 129 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 GAL3ST2Q9H3Q3 398 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 DUSP21Q9H596 190 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 BEX1Q9HBH7 125 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF581Q9P0T4 197 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 ING4Q9UNL4 249 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 FOXJ3Q9UPW0 622 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 TPRKBQ9Y3C4 175 aa5.58□□□□□ -1.52
HMGN1-205ENST00000419378 TBL2Q9Y4P3 447 aaKnown RBP5.58□□□□□ -1.52
HMGN1-205ENST00000419378 KIAA2026Q5HYC2 2103 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 MEIKINA0A087WXM9 373 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 A0A1B0GUS0 222 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 A0A1W2PP11 408 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CLPSL1A2RUU4 121 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 FAM172BPA6NC97 362 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms