RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 VHLP40337 213 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 Q3ZCU0 254 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 ABCA11PQ4W5N1 156 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 C6orf183Q5T699 404 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 TRAT1Q6PIZ9 186 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 PRSS48Q7RTY5 328 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 LINC00311Q8N616 119 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 DRAM1Q8N682 238 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 OR56B4Q8NH76 319 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 UBALD1Q8TB05 177 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 FAM46BQ96A09 425 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 UBE2QL1A1L167 161 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 C12orf77C9JDV5 145 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 SPINT2O43291 252 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 PDCD6O75340 191 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 MPIG6BO95866 241 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 GAPDHP04406 335 aaKnown RBP13.13□□□□□ -0.31
LINC00404-201ENST00000418660 SNRNP70P08621 437 aaKnown RBP13.13□□□□□ -0.31
LINC00404-201ENST00000418660 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 EMX1Q04741 257 aaPredicted RBP13.13□□□□□ -0.31
LINC00404-201ENST00000418660 ZNF816Q0VGE8 651 aaPredicted RBP13.13□□□□□ -0.31
LINC00404-201ENST00000418660 MLLT11Q13015 90 aaPredicted RBP13.13□□□□□ -0.31
LINC00404-201ENST00000418660 TRAM1Q15629 374 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 MOB4Q9Y3A3 225 aa13.13□□□□□ -0.31
LINC00404-201ENST00000418660 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 CCRL2O00421 344 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 HSD17B6O14756 317 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 LPLP06858 475 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 CPEP16870 476 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 RCC1P18754 421 aaPredicted RBP13.12□□□□□ -0.31
LINC00404-201ENST00000418660 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
LINC00404-201ENST00000418660 HTR2CP28335 458 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 NSUN5P1Q3KNT7 163 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 OR10K2Q6IF99 312 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 CENPVQ7Z7K6 275 aaPredicted RBP13.12□□□□□ -0.31
LINC00404-201ENST00000418660 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 OR5AU1Q8NGC0 362 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 CNBD2Q96M20 576 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 CITED2Q99967 270 aaPredicted RBP13.12□□□□□ -0.31
LINC00404-201ENST00000418660 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
LINC00404-201ENST00000418660 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
LINC00404-201ENST00000418660 VWFP04275 2813 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 IGHV1-3A0A0C4DH29 117 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 SLC22A1O15245 554 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 HBZP02008 142 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 OPN1MWP04001 364 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 OPN1MW2P0DN77 364 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 OPN1MW3P0DN78 364 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM11P17152 192 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 IL3RAP26951 378 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
LINC00404-201ENST00000418660 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
LINC00404-201ENST00000418660 HES1Q14469 280 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 FAM53AQ6NSI3 398 aaPredicted RBP13.11□□□□□ -0.31
LINC00404-201ENST00000418660 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 OR6M1Q8NGM8 313 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 OR1L1Q8NH94 360 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 ST6GALNAC6Q969X2 333 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 NEDD4LQ96PU5 975 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 MGLLQ99685 303 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM59Q9BXS4 323 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 TAF9BQ9HBM6 251 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 GNG12Q9UBI6 72 aa13.11□□□□□ -0.31
LINC00404-201ENST00000418660 SH2D7A6NKC9 451 aaPredicted RBP13.1□□□□□ -0.31
LINC00404-201ENST00000418660 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 ARL6IP5O75915 188 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 BPNT1O95861 308 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 CHATP28329 748 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 MAP2K4P45985 399 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 QRFPP83859 136 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 CD83Q01151 205 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 EBI3Q14213 229 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 NKAPLQ5M9Q1 402 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 SLC25A48Q6ZT89 311 aaKnown RBP13.1□□□□□ -0.31
LINC00404-201ENST00000418660 MOB3BQ86TA1 216 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 PRR18Q8N4B5 295 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 ZNF439Q8NDP4 499 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
LINC00404-201ENST00000418660 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 KCNIP1Q9NZI2 227 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 BLOC1S6Q9UL45 172 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 RAB26Q9ULW5 256 aa13.1□□□□□ -0.31
LINC00404-201ENST00000418660 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
LINC00404-201ENST00000418660 SLC31A2O15432 143 aa13.09□□□□□ -0.31
LINC00404-201ENST00000418660 FGF16O43320 207 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms