RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 IRF2P14316 349 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 VAMP1P23763 118 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 HAAOP46952 286 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.46
SGCE-202ENST00000415788 MOGAT2Q3SYC2 334 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 SPRNQ5BIV9 151 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 DMRTC1Q5HYR2 192 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 MOGAT3Q86VF5 341 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 LYPD6Q86Y78 171 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 JAGN1Q8N5M9 183 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 LINC00469Q8N7U9 141 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 OR4S1Q8NGB4 309 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 CASTOR1Q8WTX7 329 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 TMED6Q8WW62 240 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 AQP10Q96PS8 301 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 RNF126Q9BV68 326 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 PKIBQ9C010 78 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 CHODLQ9H9P2 273 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 RAB18Q9NP72 206 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 COLCA2A8K830 154 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 C1orf196B1AJZ1 125 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 J3QT63 122 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 RAB27BO00194 218 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 ACAA1P09110 424 aaPredicted RBP12.2□□□□□ -0.46
SGCE-202ENST00000415788 PET100P0DJ07 73 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 CFHR2P36980 270 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 PTGFRP43088 359 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 DSCR9P59020 149 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 KISS1Q15726 138 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 ACTBL2Q562R1 376 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 TMEM128Q5BJH2 165 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 HOGA1Q86XE5 327 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 SCCPDHQ8NBX0 429 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 CCL17Q92583 94 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 SCGB3A2Q96PL1 93 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 UFSP2Q9NUQ7 469 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 CACNA1DQ01668 2161 aa12.2□□□□□ -0.46
SGCE-202ENST00000415788 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 IGHV3-64DA0A0J9YX35 117 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 C13orf42A0A1B0GVH6 325 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 MFNGO00587 321 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 UBE2CO00762 179 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 CDIPTO14735 213 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 CDC14BO60729 498 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 LY6HO94772 140 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 BPNT1O95861 308 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 AKR1C4P17516 323 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 PDLIM4P50479 330 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 TMEM33P57088 247 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 C11orf53Q8IXP5 236 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 PNLDC1Q8NA58 520 aaKnown RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 ZSCAN4Q8NAM6 433 aaPredicted RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 OR52N4Q8NGI2 321 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 FOXC2Q99958 501 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 RNF7Q9UBF6 113 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 FBLN5Q9UBX5 448 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 NDUFS8O00217 210 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 FABP1P07148 127 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 COL8A2P25067 703 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 ZNF93P35789 620 aaPredicted RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
SGCE-202ENST00000415788 IL24Q13007 206 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 HABP2Q14520 560 aaPredicted RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 SMCO1Q147U7 214 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 CLEC2AQ6UVW9 174 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 C2CD4CQ8TF44 421 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 GAL3ST1Q99999 423 aa12.19□□□□□ -0.46
SGCE-202ENST00000415788 ZMAT3Q9HA38 289 aaKnown RBP12.19□□□□□ -0.46
SGCE-202ENST00000415788 HRNRQ86YZ3 2850 aaPredicted RBP12.18□□□□□ -0.46
SGCE-202ENST00000415788 FBN2P35556 2912 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 SFT2D2O95562 160 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 CD5P06127 495 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 MUC1P15941 1255 aaPredicted RBP12.18□□□□□ -0.46
SGCE-202ENST00000415788 HRH1P35367 487 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 PEG10Q86TG7 708 aaKnown RBP12.18□□□□□ -0.46
SGCE-202ENST00000415788 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 MKXQ8IYA7 352 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 ZNF561Q8N587 486 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 ZNF525Q8N782 197 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 TIMD4Q96H15 378 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 GPER1Q99527 375 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 KPTNQ9Y664 436 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
SGCE-202ENST00000415788 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
SGCE-202ENST00000415788 FBXO24O75426 580 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms