RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CDC42EP2O14613 210 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 SLC35E2P0CK97 266 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 ATG4DQ86TL0 474 aaPredicted RBP17.61■□□□□ 0.41
AP1S3-205ENST00000415298 C17orf78Q8N4C9 275 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 CHST4Q8NCG5 386 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 STARD4Q96DR4 205 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 ZNF703Q9H7S9 590 aaPredicted RBP17.61■□□□□ 0.41
AP1S3-205ENST00000415298 IGKV3D-11A0A0A0MRZ8 115 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 SERINC4A6NH21 518 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 IGLV3-21P80748 117 aaPredicted RBP17.61■□□□□ 0.41
AP1S3-205ENST00000415298 OR2Y1Q8NGV0 311 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 CLDND2Q8NHS1 167 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 FAM3DQ96BQ1 224 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 FGGYQ96C11 551 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 RBMXL1Q96E39 390 aaKnown RBP17.61■□□□□ 0.41
AP1S3-205ENST00000415298 NEUROD4Q9HD90 331 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 HIF1ANQ9NWT6 349 aa17.61■□□□□ 0.41
AP1S3-205ENST00000415298 TAX1BP3O14907 124 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 GPR137BO60478 399 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 KLF7O75840 302 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 SPINK2P20155 84 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 GALR1P47211 349 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 RPS18P62269 152 aaKnown RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 ELOA3BQ3SY89 546 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 SP5Q6BEB4 398 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 PET117Q6UWS5 81 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 C6orf15Q6UXA7 325 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 WDR82Q6UXN9 313 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 C16orf82Q7Z2V1 217 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 C5orf17Q8NAS9 161 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 ELOA3Q8NG57 546 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 DPF1Q92782 380 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 P2RX2Q9UBL9 471 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 RHBDD3Q9Y3P4 386 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 UCP1P25874 307 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 PTGER4P35408 488 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 GPR6P46095 362 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 FXYD6P3P58550 94 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 SMAGPQ0VAQ4 97 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 NUP210LQ5VU65 1888 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 NPEPL1Q8NDH3 523 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 MARCH1Q8TCQ1 289 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 DNAJA3Q96EY1 480 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 DGAT2Q96PD7 388 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 SSBP4Q9BWG4 385 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-205ENST00000415298 OR51B2Q9Y5P1 312 aa17.6■□□□□ 0.41
AP1S3-205ENST00000415298 FRYQ5TBA9 3013 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 RIIAD1A6NNX1 92 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 TIMP3P35625 211 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 SOX2P48431 317 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 MRGPRGQ86SM5 289 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 NECAP1Q8NC96 275 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 ASB5Q8WWX0 329 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 C8orf44Q96CB5 159 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 LPAR5Q9H1C0 372 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 A0A1B0GUS0 222 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 HMGN2P05204 90 aaKnown RBP17.59■□□□□ 0.41
AP1S3-205ENST00000415298 S100GP29377 79 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 ANKRD55Q3KP44 614 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 NUDT9Q9BW91 350 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 KCNK15Q9H427 330 aa17.59■□□□□ 0.41
AP1S3-205ENST00000415298 RCL1Q9Y2P8 373 aaKnown RBP17.59■□□□□ 0.41
AP1S3-205ENST00000415298 TRAV8-7A0A075B6U6 113 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 TRAF3IP2O43734 574 aaPredicted RBP17.58■□□□□ 0.41
AP1S3-205ENST00000415298 PRKNO60260 465 aaPredicted RBP17.58■□□□□ 0.41
AP1S3-205ENST00000415298 PF4V1P10720 104 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 NANOS3P60323 173 aaKnown RBP17.58■□□□□ 0.41
AP1S3-205ENST00000415298 HOGA1Q86XE5 327 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 TMEM217Q8N7C4 229 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 TCTEX1D1Q8N7M0 179 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 NUP43Q8NFH3 380 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 OR5AU1Q8NGC0 362 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 PLEKHJ1Q9NW61 149 aa17.58■□□□□ 0.41
AP1S3-205ENST00000415298 PTRH2Q9Y3E5 179 aaKnown RBP17.58■□□□□ 0.41
AP1S3-205ENST00000415298 KLRC4-KLRK1H3BQV0 150 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 CD99P14209 185 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 ZNF43P17038 809 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 HERV-K104P63124 156 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 CSNK2A1P68400 391 aaPredicted RBP17.58■□□□□ 0.4
AP1S3-205ENST00000415298 FHL5Q5TD97 284 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 RAET1LQ5VY80 246 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 CSNK2A3Q8NEV1 391 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 OR1B1Q8NGR6 318 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 ABHD17AQ96GS6 310 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 FAM110AQ9BQ89 295 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 MANBALQ9NQG1 85 aa17.58■□□□□ 0.4
AP1S3-205ENST00000415298 OR2T8A6NH00 312 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 ZNF716A6NP11 495 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 HRASP01112 189 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 GYPBP06028 91 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 GCH1P30793 250 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 TCTEX1D4Q5JR98 221 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 PLXDC2Q6UX71 529 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 LRRC69Q6ZNQ3 347 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 SLC35F2Q8IXU6 374 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 ZNF440Q8IYI8 595 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 CT55Q8WUE5 264 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 PRR13Q9NZ81 148 aa17.57■□□□□ 0.4
AP1S3-205ENST00000415298 NKX2-6A6NCS4 301 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms