RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GRK1Q15835 563 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 DEFB136Q30KP8 78 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 TPTE2P1Q5T6R2 138 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 RTN4RL2Q86UN3 420 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 ANGPTL5Q86XS5 388 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 NKAIN3Q8N8D7 197 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 OR52N4Q8NGI2 321 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 OR13C5Q8NGS8 318 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 FGGYQ96C11 551 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 CHST6Q9GZX3 395 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 PPIL3Q9H2H8 161 aaKnown RBP7.52□□□□□ -1.21
RFFL-203ENST00000413582 RNF167Q9H6Y7 350 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 PLEKHA1Q9HB21 404 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 PALMDQ9NP74 551 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 ZNF256Q9Y2P7 627 aaPredicted RBP7.52□□□□□ -1.21
RFFL-203ENST00000413582 A0A075B6Q4 140 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 A6NIN4 97 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 NOTOA8MTQ0 251 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 LY6LH3BQJ8 138 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 PSPNO60542 156 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 HAND1O96004 215 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 RAB3AP20336 220 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 CD34P28906 385 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 GDNFP39905 211 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 SCAND1P57086 179 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 PPP3R1P63098 170 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 INSL4Q14641 139 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 HLA-DRB5Q30154 266 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 TRAPPC6BQ86SZ2 158 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 SBSPONQ8IVN8 264 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 COMMD1Q8N668 190 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 C5orf56Q8N8D9 126 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 DNAAF1Q8NEP3 725 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 OR5M8Q8NGP6 311 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 ACOT12Q8WYK0 555 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 AP3S1Q92572 193 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 ADAT3Q96EY9 351 aaPredicted RBP7.51□□□□□ -1.21
RFFL-203ENST00000413582 CPNE2Q96FN4 548 aaPredicted RBP7.51□□□□□ -1.21
RFFL-203ENST00000413582 CEP19Q96LK0 163 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 CHST5Q9GZS9 411 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 NXF2Q9GZY0 626 aaKnown RBP7.51□□□□□ -1.21
RFFL-203ENST00000413582 ZNF286AQ9HBT8 521 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 TMEM138Q9NPI0 162 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 MTCH1Q9NZJ7 389 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 IL36RNQ9UBH0 155 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 UBE2J1Q9Y385 318 aaPredicted RBP7.51□□□□□ -1.21
RFFL-203ENST00000413582 SMAD5-AS1Q9Y6J3 95 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 V9GY05 133 aa7.51□□□□□ -1.21
RFFL-203ENST00000413582 IGKV1-27A0A075B6S5 117 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A18PA6NE21 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A16PA6NEW6 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A20PA6NIJ5 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A9PA6NNJ1 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SERPINE3A8MV23 424 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A12PA8MX19 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A5PA8MXJ8 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SEC14L6B5MCN3 397 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 MGST3O14880 152 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 MAGEB3O15480 346 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SULT1B1O43704 296 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A15PP0C7V4 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A13PP0C7W8 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A14PP0C7W9 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM90A24PP0C7X0 464 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 PRKACBP22694 351 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 GABRR1P24046 479 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 CDK2P24941 298 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 BDKRB2P30411 391 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 TGFBR1P36897 503 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 CEACAM3P40198 252 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 MNDAP41218 407 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 OR3A1P47881 315 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 P2RX3P56373 397 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 UBE2V2Q15819 145 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 FAM27D1Q5T7N8 215 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 GLT8D1Q68CQ7 371 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 ZFAND6Q6FIF0 208 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 OR52W1Q6IF63 320 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 CCDC144NLQ6NUI1 221 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 LRRTM1Q86UE6 522 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 STPG2Q8N412 459 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 OR8U1Q8NH10 309 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 TRMT10AQ8TBZ6 339 aaKnown RBP7.5□□□□□ -1.21
RFFL-203ENST00000413582 SLAMF9Q96A28 289 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 CREB3L1Q96BA8 519 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SPSB1Q96BD6 273 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 CMTM3Q96MX0 182 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 UQCC2Q9BRT2 126 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SLIRPQ9GZT3 109 aaKnown RBP7.5□□□□□ -1.21
RFFL-203ENST00000413582 GAL3ST2Q9H3Q3 398 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 SEBOXQ9HB31 216 aaPredicted RBP7.5□□□□□ -1.21
RFFL-203ENST00000413582 ABRACLQ9P1F3 81 aa7.5□□□□□ -1.21
RFFL-203ENST00000413582 TRAV8-7A0A075B6U6 113 aa7.49□□□□□ -1.21
RFFL-203ENST00000413582 IGKV1-9A0A0C4DH69 117 aa7.49□□□□□ -1.21
RFFL-203ENST00000413582 FAM230AA0A1W2PPH8 454 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms