RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 DAPK2Q9UIK4 370 aa10.64□□□□□ -0.71
HDAC8-210ENST00000412342 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
HDAC8-210ENST00000412342 KCNK7Q9Y2U2 307 aa10.64□□□□□ -0.71
HDAC8-210ENST00000412342 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
HDAC8-210ENST00000412342 TRBV6-6A0A0A6YYG2 114 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 H3BUX3 64 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 TFAP2AP05549 437 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 HKR1P10072 659 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 NFYBP25208 207 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 HTR1DP28221 377 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 ALDH3B2P48448 385 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 COMPP49747 757 aaPredicted RBP10.63□□□□□ -0.71
HDAC8-210ENST00000412342 HMGN3Q15651 99 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 SSX2Q16385 188 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 LTC4SQ16873 150 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 LRRC75BQ2VPJ9 315 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 C6orf183Q5T699 404 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 OLFML2AQ68BL7 652 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 SLC16A12Q6ZSM3 486 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 OR5R1Q8NH85 324 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 OR1L1Q8NH94 360 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 SPATA3Q8NHX4 192 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 LEAP2Q969E1 77 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 SSX3Q99909 188 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 HDHD3Q9BSH5 251 aaPredicted RBP10.63□□□□□ -0.71
HDAC8-210ENST00000412342 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
HDAC8-210ENST00000412342 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 PLEKHJ1Q9NW61 149 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 GFOD1Q9NXC2 390 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 AK3Q9UIJ7 227 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 TRAPPC2LQ9UL33 140 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 PSG11Q9UQ72 335 aa10.63□□□□□ -0.71
HDAC8-210ENST00000412342 FAM181BA6NEQ2 426 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 BUB1B-PAK6H3BSN5 160 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 J3QR06 171 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 MFNGO00587 321 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 GPR137BO60478 399 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 IGHV3-7P01780 117 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 HBZP02008 142 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
HDAC8-210ENST00000412342 DYNLT3P51808 116 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 LSM3P62310 102 aaKnown RBP10.62□□□□□ -0.71
HDAC8-210ENST00000412342 RELBQ01201 579 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 TRAT1Q6PIZ9 186 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 Q6ZTK2 550 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 C8orf31Q8N9H6 132 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 ZNF439Q8NDP4 499 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 OR10R2Q8NGX6 335 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 MMP28Q9H239 520 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 TAF9BQ9HBM6 251 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 DPM3Q9P2X0 92 aa10.62□□□□□ -0.71
HDAC8-210ENST00000412342 IGHV3-43A0A0B4J1X8 118 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 SDCBPO00560 298 aaPredicted RBP10.61□□□□□ -0.71
HDAC8-210ENST00000412342 GABARAPO95166 117 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 IGHV3-43DP0DP04 118 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 RPS19P39019 145 aaKnown RBP10.61□□□□□ -0.71
HDAC8-210ENST00000412342 SCAND1P57086 179 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 RPL15P61313 204 aaKnown RBP10.61□□□□□ -0.71
HDAC8-210ENST00000412342 NCS1P62166 190 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 ACTG1P63261 375 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 TMEM30BQ3MIR4 351 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 Q3ZCU0 254 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 PLA1AQ53H76 456 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 OR5H6Q8NGV6 325 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 NDNFQ8TB73 568 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 SLC25A38Q96DW6 304 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 NAA50Q9GZZ1 169 aaKnown RBP10.61□□□□□ -0.71
HDAC8-210ENST00000412342 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 HILPDAQ9Y5L2 63 aa10.61□□□□□ -0.71
HDAC8-210ENST00000412342 A0A1W2PPE3 182 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 POM121CA8CG34 1229 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 LEUTXA8MZ59 168 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 TOR1AO14656 332 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 SLC31A2O15432 143 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 SPINT2O43291 252 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 CHST1O43916 411 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 TMEM127O75204 238 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 HIST1H1DP16402 221 aaKnown RBP10.6□□□□□ -0.71
HDAC8-210ENST00000412342 GNG10P50151 68 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 RAB13P51153 203 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 ZNF134P52741 427 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 PRRX1P54821 245 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 HTD2P86397 168 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 DIAPH2-AS1Q14236 149 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 GNMTQ14749 295 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 FAM189A2Q15884 450 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 CTF1Q16619 201 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 FBLN7Q53RD9 439 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 MOB1BQ7L9L4 216 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 RAB3CQ96E17 227 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 RIMS4Q9H426 269 aaPredicted RBP10.6□□□□□ -0.71
HDAC8-210ENST00000412342 C12orf4Q9NQ89 552 aa10.6□□□□□ -0.71
HDAC8-210ENST00000412342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC8-210ENST00000412342 TCF19Q9Y242 345 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms