RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 TRBV6-7A0A0A0MS04 114 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 IGKV1D-13A0A0B4J2D9 117 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 IGKV1-13P0DP09 117 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 ABCA11PQ4W5N1 156 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 C6orf183Q5T699 404 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 OR52L2PQ8NGH6 319 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF431Q8TF32 576 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-204ENST00000409727 TMEM230Q96A57 120 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 MED30Q96HR3 178 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 FYTTD1Q96QD9 318 aaKnown RBP10.35□□□□□ -0.75
CHMP3-204ENST00000409727 CABLES2Q9BTV7 478 aa10.35□□□□□ -0.75
CHMP3-204ENST00000409727 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-204ENST00000409727 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 POM121CA8CG34 1229 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 CEACAM18A8MTB9 384 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 SNRPGP15A8MWD9 76 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 HSD17B6O14756 317 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 OMGP23515 440 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 CEACAM6P40199 344 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 ECI1P42126 302 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 PIGPP57054 158 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 GNMTQ14749 295 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 SURF2Q15527 256 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 H1FOOQ8IZA3 346 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 ZFAND1Q8TCF1 268 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 NEU4Q8WWR8 484 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 ST6GAL2Q96JF0 529 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 PARP12Q9H0J9 701 aaKnown RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 FAM234AQ9H0X4 552 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 RDH8Q9NYR8 311 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 CTSZQ9UBR2 303 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 PPIHO43447 177 aaKnown RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 RP2O75695 350 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 TRAPPC2P0DI81 140 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 TRAPPC2BP0DI82 140 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 ZBTB25P24278 435 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 TAS2R31P59538 309 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 TMEM128Q5BJH2 165 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 OR10V1Q8NGI7 309 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 LURAP1Q96LR2 239 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 GPHA2Q96T91 129 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 CHIAQ9BZP6 476 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 SLC5A7Q9GZV3 580 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 OR2S2Q9NQN1 319 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 DLL4Q9NR61 685 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 MGAT4CQ9UBM8 478 aa10.34□□□□□ -0.75
CHMP3-204ENST00000409727 RBM7Q9Y580 266 aaKnown RBP10.34□□□□□ -0.75
CHMP3-204ENST00000409727 TEX13DA0A0J9YY54 714 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-204ENST00000409727 GOSR2O14653 212 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 SPINT2O43291 252 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 NDUFB3O43676 98 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 FCN3O75636 299 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-204ENST00000409727 COX6B1P14854 86 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 CD34P28906 385 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
CHMP3-204ENST00000409727 PAX5Q02548 391 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 KCNJ8Q15842 424 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 C2orf68Q2NKX9 166 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 SP5Q6BEB4 398 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-204ENST00000409727 KCTD9Q7L273 389 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 SLC38A6Q8IZM9 456 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-204ENST00000409727 NINJ1Q92982 152 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 C14orf79Q96F83 325 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 NARFLQ9H6Q4 476 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 OR6C3Q9NZP0 311 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 OR2W1Q9Y3N9 320 aa10.33□□□□□ -0.76
CHMP3-204ENST00000409727 UBR5O95071 2799 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TRGV10A0A0A0MS01 117 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SMLR1H3BR10 107 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 DVL1O14640 695 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TNFSF12O43508 249 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TUSC2O75896 110 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SIX6O95475 246 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 IGHV3-7P01780 117 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SULT1A3P0DMM9 295 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SULT1A4P0DMN0 295 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 PLA2G2AP14555 144 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 GNRHRP30968 328 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TLE4Q04727 773 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 FAHD2BQ6P2I3 314 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 C11orf88Q6PI97 169 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 CLEC18BQ6UXF7 455 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 ZNF818PQ6ZRF7 136 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms