RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SYT6Q5T7P8 510 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 CENPVQ7Z7K6 275 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 LRRTM1Q86UE6 522 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 UBALD1Q8TB05 177 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 CST11Q9H112 138 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 RAB9BQ9NP90 201 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 MOB4Q9Y3A3 225 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 C12orf77C9JDV5 145 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 GAPDHP04406 335 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 CD83Q01151 205 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 ZNF816Q0VGE8 651 aaPredicted RBP15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 TMEM30BQ3MIR4 351 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 C1orf100Q5SVJ3 147 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 C6orf183Q5T699 404 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 GLT8D1Q68CQ7 371 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 SIGIRRQ6IA17 410 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 TRAT1Q6PIZ9 186 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 CEACAM19Q7Z692 300 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 OR4F17Q8NGA8 305 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 OR4K15Q8NH41 348 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 OR4F4Q96R69 305 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 ANKRD60Q9BZ19 345 aa15.61■□□□□ 0.09
TSPAN4-209ENST00000409543 SH2D7A6NKC9 451 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 CCRL2O00421 344 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 HSD17B6O14756 317 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 SPINT2O43291 252 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 SRMP19623 302 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 VHLP40337 213 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 HES1Q14469 280 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 C1QL4Q86Z23 238 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 FAM46BQ96A09 425 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 R3HDM4Q96D70 268 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 VCX3BQ9H321 246 aa15.6■□□□□ 0.09
TSPAN4-209ENST00000409543 IGHV3-43A0A0B4J1X8 118 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 RGS10O43665 173 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 PDCD6O75340 191 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 IGHV3-43DP0DP04 118 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 CD37P11049 281 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 TMEM11P17152 192 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 HSD17B12Q53GQ0 312 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 RBM48Q5RL73 367 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 FAM53AQ6NSI3 398 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 UFD1Q92890 307 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 ISYNA1Q9NPH2 558 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 MBNL3Q9NUK0 354 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 PLXNB1O43157 2135 aa15.59■□□□□ 0.09
TSPAN4-209ENST00000409543 IGHV1-3A0A0C4DH29 117 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 UBE2QL1A1L167 161 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 FGF16O43320 207 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 MPIG6BO95866 241 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 IGKV1D-33P01593 117 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 IGKV1-33P01594 117 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 HBZP02008 142 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 UCHL1P09936 223 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 VSIG8P0DPA2 414 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 RCC1P18754 421 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 IL3RAP26951 378 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 REG1BP48304 166 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 TPBGQ13641 420 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 EBI3Q14213 229 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 HNF4GQ14541 408 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 TCTEX1D4Q5JR98 221 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 C9orf152Q5JTZ5 239 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 LIPKQ5VXJ0 399 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 MOB3BQ86TA1 216 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 ZNF554Q86TJ5 538 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 C5orf56Q8N8D9 126 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 ST6GALNAC6Q969X2 333 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 GNG12Q9UBI6 72 aa15.58■□□□□ 0.08
TSPAN4-209ENST00000409543 TGP01266 2768 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 G3V4G9 280 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 CRHBPP24387 322 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 TRAM1Q15629 374 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 SAMD5Q5TGI4 173 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 SLC25A48Q6ZT89 311 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 IZUMO1Q8IYV9 350 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 PRR18Q8N4B5 295 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 ZNF439Q8NDP4 499 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 OR1L1Q8NH94 360 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 KCNG3Q8TAE7 436 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 RTN4IP1Q8WWV3 396 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 TMEM203Q969S6 136 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 TAF9BQ9HBM6 251 aa15.57■□□□□ 0.08
TSPAN4-209ENST00000409543 TCRBV4S1A1TA0A5B7 111 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 SLC22A1O15245 554 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 SLC31A2O15432 143 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 HSMCR30P0CW71 290 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 CHATP28329 748 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 HTR2CP28335 458 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 HSPA13P48723 471 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 ZNF137PP52743 207 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 RPS27AP62979 156 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 MLLT11Q13015 90 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 BEAN1Q3B7T3 259 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 CT45A1Q5HYN5 189 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 STEAP3Q658P3 488 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 OR10K2Q6IF99 312 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 PRSS48Q7RTY5 328 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 OR4X2Q8NGF9 303 aa15.56■□□□□ 0.08
TSPAN4-209ENST00000409543 CT45A3Q8NHU0 189 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms