RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SSMEM1Q8WWF3 244 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 KCNK17Q96T54 332 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 UFC1Q9Y3C8 167 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 OR2T8A6NH00 312 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 PSG2P11465 335 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 FGF12P61328 243 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 ZNF154Q13106 437 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 HOGA1Q86XE5 327 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 SMIM10L1P0DMW3 83 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 HTN1P15515 57 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 DGAT2L7PQ6IED9 249 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 OR4P4Q8NGL7 312 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 SMIM10Q96HG1 83 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 MRPS18AQ9NVS2 196 aaKnown RBP21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 LOXL3P58215 753 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 WFDC3Q8IUB2 231 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 OR8G5Q8NG78 346 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 LINC00052Q96N35 136 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 SPSB2Q99619 263 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 SLC35B3Q9H1N7 401 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 SPINK4O60575 86 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 GFRA1P56159 465 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 Q1RN00 199 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 PTX4Q96A99 478 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 MRGPRGQ86SM5 289 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 TAF1LQ8IZX4 1826 aa21.74■■□□□ 1.07
SPIRE1-202ENST00000409402 C19orf35Q6ZS72 473 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 PRSS3P2Q8NHM4 247 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 PHYHIPLQ96FC7 376 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 ELOVL5Q9NYP7 299 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 HPRT1P00492 218 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 HIST1H1EP10412 219 aaKnown RBP21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 MC5RP33032 325 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 ANKRD55Q3KP44 614 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 RNASEKQ6P5S7 137 aaKnown RBP21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 SEZ6L2Q6UXD5 910 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 PARP11Q9NR21 331 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 PPP1R32Q7Z5V6 425 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 SNX22Q96L94 193 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 GPX7Q96SL4 187 aaPredicted RBP21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 CLLU1Q5K131 121 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 TPRX1Q8N7U7 411 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 MRPL24Q96A35 216 aaKnown RBP21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 FOXD3Q9UJU5 478 aaPredicted RBP21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 TMEM88Q6PEY1 159 aa21.73■■□□□ 1.07
SPIRE1-202ENST00000409402 MED19A0JLT2 244 aaPredicted RBP21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 NEURL1O76050 574 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 CDS2O95674 445 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 PMCHP20382 165 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 FDCSPQ8NFU4 85 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 C9orf172C9J069 976 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 ORM1P02763 201 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 MPV17P39210 176 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 OR1L6Q8NGR2 347 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 ZNF426Q9BUY5 554 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 CLDN34H7C241 214 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 J3KRW8 73 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 IRF3Q14653 427 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 C5orf17Q8NAS9 161 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 STXBP6Q8NFX7 210 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 STARD4Q96DR4 205 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 HMSDA8MTL9 139 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 CD1AP06126 327 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 SULT1A1P50225 295 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 CCL19Q99731 98 aa21.72■■□□□ 1.07
SPIRE1-202ENST00000409402 HPXP02790 462 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 LIMS1P48059 325 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 HDHD3Q9BSH5 251 aaPredicted RBP21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 ZNF552Q9H707 407 aaPredicted RBP21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 COL11A1P12107 1806 aaPredicted RBP21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 SCN3AQ9NY46 2000 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 NKX2-6A6NCS4 301 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 CTSBP07858 339 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 PDLIM4P50479 330 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 HBZP02008 142 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 RIPPLY2Q5TAB7 128 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 MIOXQ9UGB7 285 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 OR2H2O95918 312 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 CRHP06850 196 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 NANOS3P60323 173 aaKnown RBP21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 BVESQ8NE79 360 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 TIAF1O95411 115 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 FCGR3AP08637 254 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 FAM209AQ5JX71 171 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 FAM222BQ8WU58 562 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 CHRNA10Q9GZZ6 450 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 NIT2Q9NQR4 276 aa21.71■■□□□ 1.07
SPIRE1-202ENST00000409402 DUXBA0A1W2PPF3 345 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 NAT2P11245 290 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 TMEM50BP56557 158 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 FUT5Q11128 374 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 ZNF273Q14593 569 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 TEPPQ6URK8 271 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 SRXN1Q9BYN0 137 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 LTBRP36941 435 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 KLHDC1Q8N7A1 406 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 MYO16Q9Y6X6 1858 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 C4orf51C9J302 202 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 KHDC3LQ587J8 217 aa21.7■■□□□ 1.06
SPIRE1-202ENST00000409402 IL19Q9UHD0 177 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms