RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 FAM185AQ8N0U4 392 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 ARRDC1Q8N5I2 433 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 ARL11Q969Q4 196 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 MRGPRFQ96AM1 343 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 MMP28Q9H239 520 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 LINC00312Q9Y6C7 94 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 PDZD2O15018 2839 aa13.9□□□□□ -0.18
SSB-202ENST00000409333 CR1P17927 2039 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 CGB3P0DN86 165 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 CGB7P0DN87 165 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 GZMHP20718 246 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 NPY4RP50391 375 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 CLEC12BQ2HXU8 276 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 TMEM200BQ69YZ2 307 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 ZNF660Q6AZW8 331 aaPredicted RBP13.89□□□□□ -0.19
SSB-202ENST00000409333 ZNF554Q86TJ5 538 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 DUSP18Q8NEJ0 188 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 CORO2AQ92828 525 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 PRRT1Q99946 306 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 ZNF2Q9BSG1 426 aaPredicted RBP13.89□□□□□ -0.19
SSB-202ENST00000409333 SSBP3Q9BWW4 388 aaPredicted RBP13.89□□□□□ -0.19
SSB-202ENST00000409333 SLC2A8Q9NY64 477 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 OR1A1Q9P1Q5 309 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 SLC23A1Q9UHI7 598 aa13.89□□□□□ -0.19
SSB-202ENST00000409333 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 TCRBP04435 133 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 CCL3L1P16619 93 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 NFYAP23511 347 aaPredicted RBP13.88□□□□□ -0.19
SSB-202ENST00000409333 OMGP23515 440 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 FCGR2CP31995 323 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 LMO4P61968 165 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 LTC4SQ16873 150 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
SSB-202ENST00000409333 LRRC75A-AS1Q8N1F1 130 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 UPRTQ96BW1 309 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 GALMQ96C23 342 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 SCP2D1Q9UJQ7 156 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 UBE2J1Q9Y385 318 aaPredicted RBP13.88□□□□□ -0.19
SSB-202ENST00000409333 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 IGHV4-61A0A0C4DH41 118 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 GPR37O15354 613 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 SPINT2O43291 252 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 CTXN2P0C2S0 81 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 IL2RGP31785 369 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 DSCR9P59020 149 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 ESCO2Q56NI9 601 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 AADACL3Q5VUY0 350 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 LHFPL1Q86WI0 220 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 OR10J5Q8NHC4 309 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 NINJ1Q92982 152 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 MBD6Q96DN6 1003 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 GINS4Q9BRT9 223 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 LPAR3Q9UBY5 353 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 OPN4Q9UHM6 478 aa13.88□□□□□ -0.19
SSB-202ENST00000409333 TRAV6A0A075B6T7 132 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 KBTBD11-OT1A0A1B0GTJ5 212 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 OR5H14A6NHG9 310 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 ZNF729A6NN14 1252 aaPredicted RBP13.87□□□□□ -0.19
SSB-202ENST00000409333 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 C22orf46C9J442 243 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 NDUFB6O95139 128 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 GNMTQ14749 295 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 RBMS2Q15434 407 aaKnown RBP13.87□□□□□ -0.19
SSB-202ENST00000409333 DHRS11Q6UWP2 260 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 TMEM17Q86X19 198 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 MINDY2Q8NBR6 621 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 OR6F1Q8NGZ6 308 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 ZNF714Q96N38 554 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 NUDT15Q9NV35 164 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 RPUSD1Q9UJJ7 312 aaKnown RBP13.87□□□□□ -0.19
SSB-202ENST00000409333 FLVCR2Q9UPI3 526 aa13.87□□□□□ -0.19
SSB-202ENST00000409333 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 HSPA12AO43301 675 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 AADACP22760 399 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 H1FOOQ8IZA3 346 aaPredicted RBP13.86□□□□□ -0.19
SSB-202ENST00000409333 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 C20orf85Q9H1P6 137 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 COPZ2Q9P299 210 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 PRRC2AP48634 2157 aaKnown RBP13.86□□□□□ -0.19
SSB-202ENST00000409333 KIAA1324LA8MWY0 1029 aaPredicted RBP13.86□□□□□ -0.19
SSB-202ENST00000409333 F2RL2O00254 374 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 MMP23AO75900 390 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 HEXAP06865 529 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 ZBTB25P24278 435 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 ZFP36P26651 326 aaKnown RBP13.86□□□□□ -0.19
SSB-202ENST00000409333 FXYD4P59646 89 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 Q5PR19 223 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 PRAMEF5Q5TYX0 476 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 PLET1Q6UQ28 207 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 OR10V1Q8NGI7 309 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 C8orf46Q8TAG6 207 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 MARCH1Q8TCQ1 289 aa13.86□□□□□ -0.19
SSB-202ENST00000409333 GIMAP1Q8WWP7 306 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms