RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ZNF691Q5VV52 312 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 C12orf73Q69YU5 71 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 ELP2Q6IA86 826 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 TRAT1Q6PIZ9 186 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 SSX6Q7RTT6 188 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 SATL1Q86VE3 508 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 PRSS35Q8N3Z0 413 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 LINC00311Q8N616 119 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 C8orf31Q8N9H6 132 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 Q8N9W7 124 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 PXT1Q8NFP0 134 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 TNFAIP8L1Q8WVP5 186 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 TSEN15Q8WW01 171 aaKnown RBP6.04□□□□□ -1.44
LSM5-202ENST00000409292 RTN4IP1Q8WWV3 396 aaPredicted RBP6.04□□□□□ -1.44
LSM5-202ENST00000409292 ST6GALNAC6Q969X2 333 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 FLYWCH2Q96CP2 140 aaKnown RBP6.04□□□□□ -1.44
LSM5-202ENST00000409292 SPACA5Q96QH8 159 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 ZNF251Q9BRH9 671 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 DPCDQ9BVM2 203 aaPredicted RBP6.04□□□□□ -1.44
LSM5-202ENST00000409292 JAM3Q9BX67 310 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 CST11Q9H112 138 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 SPACA1Q9HBV2 294 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 GNG12Q9UBI6 72 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 DHDHQ9UQ10 334 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 ORC6Q9Y5N6 252 aa6.04□□□□□ -1.44
LSM5-202ENST00000409292 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 TRAV41A0A0B4J266 112 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 A0A1W2PPE3 182 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 LINC01548A6NM66 108 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 SLC16A6O15403 523 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 GYG2O15488 501 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ATP8B1O43520 1251 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ORC5O43913 435 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ZNF780AO75290 641 aaPredicted RBP6.03□□□□□ -1.44
LSM5-202ENST00000409292 OR7C1O76099 320 aaPredicted RBP6.03□□□□□ -1.44
LSM5-202ENST00000409292 HTR3BO95264 441 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 CGB3P0DN86 165 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 CGB7P0DN87 165 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 SPNP16150 400 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 SSTR5P35346 364 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 DAPP51397 102 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 PPP3R1P63098 170 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 PAX5Q02548 391 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 DIAPH2-AS1Q14236 149 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 CDK5R1Q15078 307 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
LSM5-202ENST00000409292 ZSCAN26Q16670 478 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 C6orf183Q5T699 404 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 RSBN1Q5VWQ0 802 aaPredicted RBP6.03□□□□□ -1.44
LSM5-202ENST00000409292 PYHIN1Q6K0P9 492 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 LINC00596Q86U02 117 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 LYPD6Q86Y78 171 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ANKRD13BQ86YJ7 626 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 TCTEX1D1Q8N7M0 179 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ZNF491Q8N8L2 437 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 RNF141Q8WVD5 230 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 TRUB1Q8WWH5 349 aaKnown RBP6.03□□□□□ -1.44
LSM5-202ENST00000409292 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 Q96M66 194 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 OR5B12Q96R08 314 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 METTL9Q9H1A3 318 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 PARP11Q9NR21 331 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 TRAPPC2LQ9UL33 140 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 RYR3Q15413 4870 aa6.03□□□□□ -1.44
LSM5-202ENST00000409292 TRAV24A0A0B4J272 114 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 TMEM212A6NML5 194 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 J3QLW9 94 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 M0R129 80 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 SLC25A17O43808 307 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 FCGR1AP12314 374 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ZNF19P17023 458 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 MYF6P23409 242 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 FASP25445 335 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 RAB9AP51151 201 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ALKBH1Q13686 389 aaKnown RBP6.02□□□□□ -1.45
LSM5-202ENST00000409292 GPR176Q14439 515 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 PLGLAQ15195 96 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ATAD3CQ5T2N8 411 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 MEDAGQ5VYS4 303 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 STEAP3Q658P3 488 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 GTSCR1Q86UQ5 136 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 Q8N6K4 173 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ACBD7Q8N6N7 88 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 SUMF2Q8NBJ7 301 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 CCDC197Q8NCU1 140 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 RSRP1Q9BUV0 290 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 TUBA4BQ9H853 241 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ZNF446Q9NWS9 450 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 GFOD1Q9NXC2 390 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 KCNIP1Q9NZI2 227 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 STUB1Q9UNE7 303 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ING4Q9UNL4 249 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 ST3GAL6Q9Y274 331 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 WSB1Q9Y6I7 421 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 COL7A1Q02388 2944 aa6.02□□□□□ -1.45
LSM5-202ENST00000409292 MCRIP1C9JLW8 97 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms