RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ROM1Q03395 351 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 FAM53AQ6NSI3 398 aaPredicted RBP9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 Q6ZNX1 250 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 Q6ZSR3 168 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF679Q8IYX0 411 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 OR8H3Q8N146 312 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 Q8N9W7 124 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 BBS1Q8NFJ9 593 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 OR1N2Q8NGR9 330 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 RBMXL1Q96E39 390 aaKnown RBP9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 TNCP24821 2201 aa9.96□□□□□ -0.82
CHRNA1-203ENST00000409219 A0A075B6Q4 140 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ODAMA1E959 279 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF729A6NN14 1252 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF670-ZNF695F2Z2N8 137 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 LOC110117498-PIK3R3F6TDL0 507 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 J3QR06 171 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF254O75437 659 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 OR2H2O95918 312 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 PRKACAP17612 351 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 BCL3P20749 454 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 SLC2A5P22732 501 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 RAB7AP51149 207 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 RIDAP52758 137 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 RUNX1Q01196 453 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 MADCAM1Q13477 382 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 EBI3Q14213 229 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 SPIN3Q5JUX0 258 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 CATSPERDQ86XM0 798 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 Q8IYB0 196 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ELMOD2Q8IZ81 293 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 FAM58AQ8N1B3 248 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 Q8N1Y9 231 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 Q8N6K4 173 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 LEAP2Q969E1 77 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 COQ2Q96H96 371 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 HSPB9Q9BQS6 159 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 MOB1AQ9H8S9 216 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 ERVK13-1Q9NX77 482 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 COPS3Q9UNS2 423 aa9.95□□□□□ -0.82
CHRNA1-203ENST00000409219 FUOMA2VDF0 154 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 A8MZ25 164 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 J3QRK9 145 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 MRPL3P09001 348 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 VDAC1P21796 283 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 CD40LGP29965 261 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 SOX6P35712 828 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 RPS7P62081 194 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 KIAA0141Q14154 515 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 SLC35D3Q5M8T2 416 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 BCL2L15Q5TBC7 163 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 OR2G6Q5TZ20 316 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 CD200R1LQ6Q8B3 271 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 ST6GALNAC6Q969X2 333 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 EAF1Q96JC9 268 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 OR5B12Q96R08 314 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 RNF167Q9H6Y7 350 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 EXOSC4Q9NPD3 245 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 IKZF2Q9UKS7 526 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 SSR3Q9UNL2 185 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 PEX16Q9Y5Y5 336 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
CHRNA1-203ENST00000409219 IGHV3-72A0A0B4J1Y9 119 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 CCDC182A6NF36 153 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 H3BSH0 61 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 SULT1C4O75897 302 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 APOL3O95236 402 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 CCL1P22362 96 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 GALP22466 123 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 FGF9P31371 208 aaPredicted RBP9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 ETV6P41212 452 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 GNG10P50151 68 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 FUT6P51993 359 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 LIPKQ5VXJ0 399 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 PLEKHG7Q6ZR37 379 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 LYPD6Q86Y78 171 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 IZUMO1Q8IYV9 350 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 ACBD7Q8N6N7 88 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF491Q8N8L2 437 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 LINC00476Q8WZB0 136 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 UFD1Q92890 307 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 BORCS8Q96FH0 119 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 KCTD7Q96MP8 289 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 PPIL3Q9H2H8 161 aaKnown RBP9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 KLK15Q9H2R5 256 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 PLEKHA1Q9HB21 404 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 PSG11Q9UQ72 335 aa9.93□□□□□ -0.82
CHRNA1-203ENST00000409219 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 HSD17B6O14756 317 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 IL1AP01583 271 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 CSN2P05814 226 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 PPP5CP53041 499 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 SLURP1P55000 103 aa9.92□□□□□ -0.82
CHRNA1-203ENST00000409219 ZNF45Q02386 682 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms