RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TESK1Q15569 626 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 NSUN5P2Q63ZY6 315 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 NR2C2APQ86WQ0 139 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 ZIC4Q8N9L1 334 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 UBALD1Q8TB05 177 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 KLF14Q8TD94 323 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 R3HDM4Q96D70 268 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF251Q9BRH9 671 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 SLC35D1Q9NTN3 355 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 GNG13Q9P2W3 67 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 CNOT1A5YKK6 2376 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 SCN8AQ9UQD0 1980 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 PPIAL4EA0A075B759 164 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 LY6G6EA0A0G2JKS1 128 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 PPIAL4DF5H284 164 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 H3BP45 60 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 SYNGR1O43759 233 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 OR2H2O95918 312 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 PPIAL4FP0DN26 164 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 NQO2P16083 231 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 RPS10P46783 165 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 GUK1Q16774 197 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 RPL7L1Q6DKI1 246 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 ETV3LQ6ZN32 361 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 LYZL2Q7Z4W2 148 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 GGNQ86UU5 652 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 SLC25A28Q96A46 364 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 ATP5SQ99766 215 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 MED9Q9NWA0 146 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 PRNDQ9UKY0 176 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 PPIAL4AQ9Y536 164 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 U3KQA8 63 aa4.08□□□□□ -1.76
PCDH11X-207ENST00000406881 NKX2-6A6NCS4 301 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 K7EQM0 130 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CCL21O00585 134 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 OR13C7P0DN81 318 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SULT1A1P50225 295 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 GFRA1P56159 465 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 COL10A1Q03692 680 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 C19orf57Q0VDD7 668 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 ACSF3Q4G176 576 aaPredicted RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM255AQ5JRV8 349 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 PHYHD1Q5SRE7 291 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FOXL2NBQ6ZUU3 175 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM89BQ8N5H3 189 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 OR8B3Q8NGG8 313 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM57AQ8TBR7 257 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 GTF3AQ92664 365 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 RPEQ96AT9 228 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF488Q96MN9 340 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 OR8B2Q96RD0 313 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM222Q9H0R3 208 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 PLSCR2Q9NRY7 297 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CHD8Q9HCK8 2581 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 NOTCH2Q04721 2471 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 A0A1W2PN81 502 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF727A8MUV8 499 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM90A26D6RGX4 464 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 H7BYZ3 331 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CDX4O14627 284 aaPredicted RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CHST1O43916 411 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CRYGSP22914 178 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CHRNA7P36544 502 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 P2RY4P51582 365 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM50BP56557 158 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 PLAURQ03405 335 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FHL1Q13642 323 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 HAGHQ16775 308 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 ASPHD2Q6ICH7 369 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SLC35E4Q6ICL7 350 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 DPPA3Q6W0C5 159 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 MOB3BQ86TA1 216 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 OR10S1Q8NGN2 331 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CMTM2Q8TAZ6 248 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 PARP12Q9H0J9 701 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 OSGIN2Q9Y236 505 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 IGHV3-43A0A0B4J1X8 118 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 UBE2L5PA0A1B0GUS4 154 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 DEFB108AA8MXU0 73 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 TSTD3H0UI37 97 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 PPIHO43447 177 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SMPD2O60906 423 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 CD8AP01732 235 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 IGHV3-43DP0DP04 118 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SLC25A6P12236 298 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 RPS2P15880 293 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 MPV17P39210 176 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 RAB4BP61018 213 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SSTP61278 116 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 EWSR1Q01844 656 aaKnown RBP eCLIP4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 AESQ08117 197 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 ADIRFQ15847 76 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 HIST3H3Q16695 136 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 HIST2H3PS2Q5TEC6 136 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM90A1Q86YD7 464 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 SHISA5Q8N114 240 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 MDS2Q8NDY4 140 aa4.07□□□□□ -1.76
PCDH11X-207ENST00000406881 DYRK2Q92630 601 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms