RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 AMY1AP04745 511 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 AMY2AP04746 511 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 MAPK3P27361 379 aaPredicted RBP16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 MED22Q15528 200 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 C18orf65Q6ZTR6 163 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 OR2W3Q7Z3T1 314 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 CYYR1Q96J86 154 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 ASCL2Q99929 193 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 DUSP21Q9H596 190 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 LINC00574Q9H8X3 128 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 PCDHB16Q9NRJ7 776 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 TPRKBQ9Y3C4 175 aa16.68■□□□□ 0.26
RHBDD3-202ENST00000406335 NPIPB11E5RHQ5 1161 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 LY6LH3BQJ8 138 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 BUB1B-PAK6H3BSN5 160 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 VHLP40337 213 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 GPR176Q14439 515 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 IZUMO2Q6UXV1 221 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 CDH26Q8IXH8 852 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 TMEM104Q8NE00 496 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 NEK7Q8TDX7 302 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 CCDC107Q8WV48 283 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 RPEQ96AT9 228 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 NOL4LQ96MY1 436 aaPredicted RBP16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 DUX3Q96PT4 197 aa16.67■□□□□ 0.26
RHBDD3-202ENST00000406335 TMEM30CPA0ZSE6 113 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 SLC6A1P30531 599 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 LIPKQ5VXJ0 399 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 MS4A15Q8N5U1 240 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 NKAIN3Q8N8D7 197 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 OR9G1Q8NH87 305 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 UBALD1Q8TB05 177 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 THRSPQ92748 146 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 LINC00527Q9UJ94 153 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 PSG11Q9UQ72 335 aa16.66■□□□□ 0.26
RHBDD3-202ENST00000406335 J3QR06 171 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 RGS10O43665 173 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 MGMTP16455 207 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 CRHBPP24387 322 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 GNG10P50151 68 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 LRRTM1Q86UE6 522 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 ZNF695Q8IW36 515 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 TOMM40LQ969M1 308 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 PRR25Q96S07 402 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 SELENOIQ9C0D9 397 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 VCX3BQ9H321 246 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 RCC2Q9P258 522 aaKnown RBP16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 COL7A1Q02388 2944 aa16.65■□□□□ 0.26
RHBDD3-202ENST00000406335 OOSP1A8MZH6 123 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 CRTAPO75718 401 aaPredicted RBP16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 SC5DO75845 299 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 SNRNP70P08621 437 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 TMEM11P17152 192 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 ECI1P42126 302 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 HNF4GQ14541 408 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 RBM48Q5RL73 367 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 SIGIRRQ6IA17 410 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 FAM53AQ6NSI3 398 aaPredicted RBP16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 ZNF497Q6ZNH5 498 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 CEACAM19Q7Z692 300 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 FOXRED2Q8IWF2 684 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 TMEM203Q969S6 136 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 FAM46BQ96A09 425 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 MRPS24Q96EL2 167 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 CNBD2Q96M20 576 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 Q96M66 194 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 UQCC2Q9BRT2 126 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 CCDC90BQ9GZT6 254 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 TENM3Q9P273 2699 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 DNAH9Q9NYC9 4486 aa16.64■□□□□ 0.25
RHBDD3-202ENST00000406335 A0A1W2PPE3 182 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 C15orf65H3BRN8 121 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 MT-ND4P03905 459 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 HSMCR30P0CW71 290 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 GPR50Q13585 617 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 DIAPH2-AS1Q14236 149 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 RAB12Q6IQ22 244 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 SLC35E3Q7Z769 313 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 COMMD1Q8N668 190 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 UFD1Q92890 307 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 ARL11Q969Q4 196 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 P2RX4Q99571 388 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 AMMECR1Q9Y4X0 333 aaPredicted RBP16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 PEX16Q9Y5Y5 336 aa16.63■□□□□ 0.25
RHBDD3-202ENST00000406335 MCRIP1C9JLW8 97 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 AIPO00170 330 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 CCL24O00175 119 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 GZMHP20718 246 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 MAP2K4P45985 399 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 LUMP51884 338 aaPredicted RBP16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 RPS25P62851 125 aaKnown RBP16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 C9orf66Q5T8R8 295 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 OR10K2Q6IF99 312 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 THNSL2Q86YJ6 484 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 OR10A7Q8NGE5 316 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 OR5M8Q8NGP6 311 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 OR4K15Q8NH41 348 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 OR56B4Q8NH76 319 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 KCNK15Q9H427 330 aa16.62■□□□□ 0.25
RHBDD3-202ENST00000406335 SPACA1Q9HBV2 294 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms