RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FCGR3AP08637 254 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 SRD5A1P18405 259 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 UBE2E1P51965 193 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 TAS2R20P59543 309 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 GUCA2AQ02747 115 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 HMGN3Q15651 99 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 OR52W1Q6IF63 320 aa23.95■■□□□ 1.42
USP42-202ENST00000404008 SPINT2O43291 252 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 HBZP02008 142 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 COX7A1P24310 79 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 TALDO1P37837 337 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 GNG2P59768 71 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 PITPNAQ00169 270 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 PRR18Q8N4B5 295 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 OR13D1Q8NGV5 346 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 NUDCD2Q8WVJ2 157 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 SUCNR1Q9BXA5 334 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 RAB9BQ9NP90 201 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 MGAT4AQ9UM21 535 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 NAV3Q8IVL0 2385 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 CUBNO60494 3623 aa23.94■■□□□ 1.42
USP42-202ENST00000404008 A0A087X0M5 115 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 A0A1B0GX30 115 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 F2RL2O00254 374 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 FPR2P25090 351 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 MNDAP41218 407 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 LTC4SQ16873 150 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 BRD3OSQ6XYD6 125 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 C5orf24Q7Z6I8 188 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 PNKDQ8N490 385 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 OR1L1Q8NH94 360 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 BATF3Q9NR55 127 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 ADAM30Q9UKF2 790 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 NF1P21359 2839 aa23.93■■□□□ 1.42
USP42-202ENST00000404008 SSX5O60225 188 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 DTYMKP23919 212 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 NFYBP25208 207 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 BPIFB3P59826 476 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 RUSC1-AS1Q66K80 236 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 EXTL2Q9UBQ6 330 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 ZNF230Q9UIE0 474 aaPredicted RBP23.92■■□□□ 1.42
USP42-202ENST00000404008 A3GALT2U3KPV4 340 aa23.92■■□□□ 1.42
USP42-202ENST00000404008 IGHV2-26A0A0B4J1V2 119 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 FAM172BPA6NC97 362 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 PTHLHP12272 177 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 EPHA1P21709 976 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 CD34P28906 385 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 LOXL3P58215 753 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 HLA-DRB3P79483 266 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 UTF1Q5T230 341 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 OR11H6Q8NGC7 330 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 OR52M1Q8NGK5 317 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 CLEC7AQ9BXN2 247 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 MMP27Q9H306 513 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 ZNF69Q9UC07 566 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 SDCBPO00560 298 aaPredicted RBP23.91■■□□□ 1.42
USP42-202ENST00000404008 HLA-DQB1P01920 261 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 SRSF7Q16629 238 aaKnown RBP eCLIP23.91■■□□□ 1.42
USP42-202ENST00000404008 TMEM30BQ3MIR4 351 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 C9orf139Q6ZV77 190 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 PIP4P2Q8N4L2 257 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 ZNF286AQ9HBT8 521 aa23.91■■□□□ 1.42
USP42-202ENST00000404008 A0A1W2PRD5 423 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 A0A1W2PRF3 423 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 A0A1W2PRM7 423 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 NPFFO15130 113 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 FAM157CP0CG43 387 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 CNIH2Q6PI25 160 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 Q6ZS49 121 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 ABHD12Q8N2K0 398 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 MAFIPQ8WZ33 124 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 GALMQ96C23 342 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 MS4A7Q9GZW8 240 aaPredicted RBP23.9■■□□□ 1.42
USP42-202ENST00000404008 GFOD1Q9NXC2 390 aa23.9■■□□□ 1.42
USP42-202ENST00000404008 MRPS7Q9Y2R9 242 aaKnown RBP23.9■■□□□ 1.42
USP42-202ENST00000404008 ODF3BA8MYP8 253 aa23.89■■□□□ 1.41
USP42-202ENST00000404008 TRDCB7Z8K6 153 aa23.89■■□□□ 1.41
USP42-202ENST00000404008 HTD2P86397 168 aa23.89■■□□□ 1.41
USP42-202ENST00000404008 ZNF626Q68DY1 528 aa23.89■■□□□ 1.41
USP42-202ENST00000404008 IGHV3-43A0A0B4J1X8 118 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 SCTP09683 121 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 IGHV3-43DP0DP04 118 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 SCGB2A2Q13296 93 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 MADCAM1Q13477 382 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 MIDNQ504T8 468 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 BCL6BQ8N143 479 aaPredicted RBP23.88■■□□□ 1.41
USP42-202ENST00000404008 C22orf15Q8WYQ4 148 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 GCDHQ92947 438 aaPredicted RBP23.88■■□□□ 1.41
USP42-202ENST00000404008 LEAP2Q969E1 77 aa23.88■■□□□ 1.41
USP42-202ENST00000404008 SOX21Q9Y651 276 aaPredicted RBP23.88■■□□□ 1.41
USP42-202ENST00000404008 ARG1P05089 322 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 SAA4P35542 130 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 KIR2DS4P43632 304 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 KIR2DS1Q14954 304 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 FAM53AQ6NSI3 398 aaPredicted RBP23.87■■□□□ 1.41
USP42-202ENST00000404008 IL1F10Q8WWZ1 152 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 OCSTAMPQ9BR26 566 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 ST6GALNAC5Q9BVH7 336 aa23.87■■□□□ 1.41
USP42-202ENST00000404008 TPPPO94811 219 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 PRSS3P35030 304 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms