RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CENPNQ96H22 339 aaPredicted RBP9.27□□□□□ -0.93
LINC00544-201ENST00000400540 JAM3Q9BX67 310 aa9.27□□□□□ -0.93
LINC00544-201ENST00000400540 IFT22Q9H7X7 185 aa9.27□□□□□ -0.93
LINC00544-201ENST00000400540 ING4Q9UNL4 249 aa9.27□□□□□ -0.93
LINC00544-201ENST00000400540 SIRT4Q9Y6E7 314 aaPredicted RBP9.27□□□□□ -0.93
LINC00544-201ENST00000400540 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
LINC00544-201ENST00000400540 I3L521 148 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 EI24O14681 340 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 MAGEB3O15480 346 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 IGF1P05019 195 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ALPLP05186 524 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 GABRB1P18505 474 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 GZMHP20718 246 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 IL3RAP26951 378 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 VHLP40337 213 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 NHLRC3Q5JS37 347 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 MEDAGQ5VYS4 303 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 XAF1Q6GPH4 301 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 SLC25A48Q6ZT89 311 aaKnown RBP9.26□□□□□ -0.93
LINC00544-201ENST00000400540 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 OR52N1Q8NH53 320 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ORAI1Q96D31 301 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 CPNE2Q96FN4 548 aaPredicted RBP9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ALX4Q9H161 411 aaPredicted RBP9.26□□□□□ -0.93
LINC00544-201ENST00000400540 AMBNQ9NP70 447 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ISYNA1Q9NPH2 558 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ERVK13-1Q9NX77 482 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF107Q9UII5 783 aaPredicted RBP9.26□□□□□ -0.93
LINC00544-201ENST00000400540 WSB1Q9Y6I7 421 aa9.26□□□□□ -0.93
LINC00544-201ENST00000400540 C12orf77C9JDV5 145 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 AIPO00170 330 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ATP6V0E1O15342 81 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ORC5O43913 435 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 MT-ND4P03905 459 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 RPSAP08865 295 aaKnown RBP9.25□□□□□ -0.93
LINC00544-201ENST00000400540 OR8U8P0C7N1 319 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 CNTFRP26992 372 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF137PP52743 207 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF616Q08AN1 781 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 LSAMPQ13449 338 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 CT45A1Q5HYN5 189 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 DDI2Q5TDH0 399 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 C5orf24Q7Z6I8 188 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF491Q8N8L2 437 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 OR8H1Q8NGG4 311 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 OR1L1Q8NH94 360 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 CT45A3Q8NHU0 189 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 NEK7Q8TDX7 302 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 DCUN1D4Q92564 292 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 RITA1Q96K30 269 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 UBE2E2Q96LR5 201 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 METTL9Q9H1A3 318 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 IL36GQ9NZH8 169 aa9.25□□□□□ -0.93
LINC00544-201ENST00000400540 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 MAGEA13PA6NCF6 341 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 TXNL1O43396 289 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 IGLV1-40P01703 118 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 CSTBP04080 98 aaKnown RBP9.24□□□□□ -0.93
LINC00544-201ENST00000400540 SPNP16150 400 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF93P35789 620 aaPredicted RBP9.24□□□□□ -0.93
LINC00544-201ENST00000400540 GBX2P52951 348 aaPredicted RBP9.24□□□□□ -0.93
LINC00544-201ENST00000400540 SLURP1P55000 103 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 GNMTQ14749 295 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 MMDQ15546 238 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 MPV17LQ2QL34 196 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 SYT6Q5T7P8 510 aaPredicted RBP9.24□□□□□ -0.93
LINC00544-201ENST00000400540 OR52I1Q8NGK6 324 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 OR13C5Q8NGS8 318 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 OR4K15Q8NH41 348 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 PYDC1Q8WXC3 89 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 TMEM106AQ96A25 262 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 MRPL48Q96GC5 212 aaKnown RBP9.24□□□□□ -0.93
LINC00544-201ENST00000400540 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 VSIG4Q9Y279 399 aa9.24□□□□□ -0.93
LINC00544-201ENST00000400540 IGHV7-81A0A0B4J1V7 117 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 TRIM64CA6NLI5 447 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 SNTNA6NMZ2 147 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 OVOL1O14753 267 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 SAP30O75446 220 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 HBZP02008 142 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 LIMS3P0CW19 117 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 LIMS4P0CW20 117 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 OR5H8P0DN80 308 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 INSL3P51460 131 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 ADARB1P78563 741 aaKnown RBP9.23□□□□□ -0.93
LINC00544-201ENST00000400540 RUNX1Q01196 453 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 Q3ZCU0 254 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 SLC22A6Q4U2R8 563 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 FAM27D1Q5T7N8 215 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 ZFAND6Q6FIF0 208 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 TMEM65Q6PI78 240 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 LINC00596Q86U02 117 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms