RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 UQCRFS1P47985 274 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 COX14Q96I36 57 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 CES1P1Q9UKY3 287 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 ISXQ2M1V0 245 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 TMEM255AQ5JRV8 349 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 STXBP6Q8NFX7 210 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 RSG1Q9BU20 258 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 MTFP1Q9UDX5 166 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 NHSQ6T4R5 1651 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
VAPA-202ENST00000400000 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
VAPA-202ENST00000400000 ATP5J2P56134 94 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 METTL1Q9UBP6 276 aaKnown RBP12.01□□□□□ -0.49
VAPA-202ENST00000400000 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
VAPA-202ENST00000400000 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
VAPA-202ENST00000400000 SYNGR2O43760 224 aa12□□□□□ -0.49
VAPA-202ENST00000400000 EIF4E3Q8N5X7 224 aaKnown RBP12□□□□□ -0.49
VAPA-202ENST00000400000 ASXL3Q9C0F0 2248 aa12□□□□□ -0.49
VAPA-202ENST00000400000 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
VAPA-202ENST00000400000 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
VAPA-202ENST00000400000 ADAT3Q96EY9 351 aaPredicted RBP12□□□□□ -0.49
VAPA-202ENST00000400000 PCED1AQ9H1Q7 454 aa12□□□□□ -0.49
VAPA-202ENST00000400000 KLK15Q9H2R5 256 aa12□□□□□ -0.49
VAPA-202ENST00000400000 J3QR06 171 aa12□□□□□ -0.49
VAPA-202ENST00000400000 ZNF253O75346 499 aa12□□□□□ -0.49
VAPA-202ENST00000400000 EFNB2P52799 333 aa12□□□□□ -0.49
VAPA-202ENST00000400000 SNX22Q96L94 193 aa12□□□□□ -0.49
VAPA-202ENST00000400000 SLC35B3Q9H1N7 401 aa12□□□□□ -0.49
VAPA-202ENST00000400000 TMEM262E9PQX1 116 aa12□□□□□ -0.49
VAPA-202ENST00000400000 RCC1P18754 421 aaPredicted RBP12□□□□□ -0.49
VAPA-202ENST00000400000 PRDX2P32119 198 aa12□□□□□ -0.49
VAPA-202ENST00000400000 CD300CQ08708 224 aa12□□□□□ -0.49
VAPA-202ENST00000400000 PRSS8Q16651 343 aa12□□□□□ -0.49
VAPA-202ENST00000400000 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
VAPA-202ENST00000400000 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
VAPA-202ENST00000400000 MPC1Q9Y5U8 109 aa12□□□□□ -0.49
VAPA-202ENST00000400000 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
VAPA-202ENST00000400000 PRB4P10163 310 aaPredicted RBP12□□□□□ -0.49
VAPA-202ENST00000400000 ARF6P62330 175 aa12□□□□□ -0.49
VAPA-202ENST00000400000 BHLHA9Q7RTU4 235 aa12□□□□□ -0.49
VAPA-202ENST00000400000 ANXA10Q9UJ72 324 aa12□□□□□ -0.49
VAPA-202ENST00000400000 SLC22A18ASQ8N1D0 253 aa12□□□□□ -0.49
VAPA-202ENST00000400000 RFLNBQ8N5W9 214 aa12□□□□□ -0.49
VAPA-202ENST00000400000 ITLN1Q8WWA0 313 aa12□□□□□ -0.49
VAPA-202ENST00000400000 DCTN5Q9BTE1 182 aa12□□□□□ -0.49
VAPA-202ENST00000400000 TRAV8-7A0A075B6U6 113 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 SSTR5P35346 364 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 HLA-DRB5Q30154 266 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 METTL26Q96S19 204 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 RNF122Q9H9V4 155 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 TMEM38BQ9NVV0 291 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 IL36RNQ9UBH0 155 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 DLK1P80370 383 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 VKORC1L1Q8N0U8 176 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 GBGT1Q8N5D6 347 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 ELOVL1Q9BW60 279 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 OTOFQ9HC10 1997 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 PAPPAQ13219 1627 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 C21orf140B9A014 251 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
VAPA-202ENST00000400000 CD82P27701 267 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
VAPA-202ENST00000400000 ID1P41134 155 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 EMP1P54849 157 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 ATG4DQ86TL0 474 aaPredicted RBP11.99□□□□□ -0.49
VAPA-202ENST00000400000 KLHDC2Q9Y2U9 406 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 PPYP01298 95 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 PF4P02776 101 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 INHBBP09529 407 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 MMP9P14780 707 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 IGSF11Q5DX21 431 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 RNF24Q9Y225 148 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 SYNGR1O43759 233 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
VAPA-202ENST00000400000 AMMECR1LQ6DCA0 310 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
VAPA-202ENST00000400000 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 SPICQ8N5J4 248 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 DUSP15Q9H1R2 295 aaPredicted RBP11.98□□□□□ -0.49
VAPA-202ENST00000400000 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 WIPI2Q9Y4P8 454 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 IGLV3-16A0A075B6K0 115 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 MFSD2BA6NFX1 497 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 CST2P09228 141 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 KIR2DL1P43626 348 aaPredicted RBP11.98□□□□□ -0.49
VAPA-202ENST00000400000 COMPP49747 757 aaPredicted RBP11.98□□□□□ -0.49
VAPA-202ENST00000400000 FAM74A4Q5TZK3 123 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 CRISP2P16562 243 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 SUCLG1P53597 346 aaKnown RBP11.98□□□□□ -0.49
VAPA-202ENST00000400000 TMEM50BP56557 158 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 FHL5Q5TD97 284 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 TIMP4Q99727 224 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 MS4A5Q9H3V2 200 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 SMPD2O60906 423 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms