RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SOCS1O15524 211 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 GSTZ1O43708 216 aaPredicted RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 AVPP01185 164 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 FCGR3AP08637 254 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 FGF2P09038 288 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 CD3GP09693 182 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 EPHA1P21709 976 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 IL3RAP26951 378 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 EBI3Q14213 229 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 HLA-DRB5Q30154 266 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ATAD3CQ5T2N8 411 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 IDNKQ5T6J7 187 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 IZUMO1Q8IYV9 350 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 OR13A1Q8NGR1 328 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ZNF418Q8TF45 676 aaPredicted RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 EDARADDQ8WWZ3 215 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ARHGAP5-AS1Q96IT6 56 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 GSX1Q9H4S2 264 aaPredicted RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 ZNRD1Q9P1U0 126 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ONECUT1Q9UBC0 465 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 AK3Q9UIJ7 227 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 SPG11Q96JI7 2443 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 MEIKINA0A087WXM9 373 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 CCDC160A6NGH7 325 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 FBP1P09467 338 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 CLEC2LP0C7M8 214 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 VEGFCP49767 419 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 BCAP31P51572 246 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 EDDM3BP56851 147 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ATXN7L3Q14CW9 347 aaPredicted RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 DMRTC1Q5HYR2 192 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 CNIH2Q6PI25 160 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 HOGA1Q86XE5 327 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 CMSS1Q9BQ75 279 aaKnown RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 NEURL2Q9BR09 285 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 ATG5Q9H1Y0 275 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 RAB18Q9NP72 206 aa6.13□□□□□ -1.43
USP16-204ENST00000399976 FAM212BQ9NTI7 297 aaPredicted RBP6.13□□□□□ -1.43
USP16-204ENST00000399976 TRBV6-7A0A0A0MS04 114 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 FAM90A9PA6NNJ1 464 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 C12orf77C9JDV5 145 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 RNASE1P07998 156 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 SLC2A2P11168 524 aaPredicted RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 EFNB2P52799 333 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 SPCS2Q15005 226 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 FAHD2BQ6P2I3 314 aaPredicted RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 C11orf88Q6PI97 169 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 PHF21AQ96BD5 680 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 GALMQ96C23 342 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 FAHD2AQ96GK7 314 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 RNF5Q99942 180 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 MMP28Q9H239 520 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 RNF167Q9H6Y7 350 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 ZNF286AQ9HBT8 521 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 TRAPPC2LQ9UL33 140 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 MMP24Q9Y5R2 645 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 LEUTXA8MZ59 168 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 J3QR06 171 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 NDUFA7O95182 113 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 SNRPBP14678 240 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 RCVRNP35243 200 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 SRP14P37108 136 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 MRPS15P82914 257 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 C6orf201Q7Z4U5 140 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 OR4P4Q8NGL7 312 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 NDNFQ8TB73 568 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 GPX8Q8TED1 209 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 ST6GALNAC6Q969X2 333 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 NAA50Q9GZZ1 169 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 DPAGT1Q9H3H5 408 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 RBMX2Q9Y388 322 aaKnown RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 DUSP1P28562 367 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 ARF6P62330 175 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 HOXA4Q00056 320 aaPredicted RBP6.12□□□□□ -1.43
USP16-204ENST00000399976 CDNFQ49AH0 187 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 ZBTB34Q8NCN2 500 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 MAPK1IP1LQ8NDC0 245 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 OR8H1Q8NGG4 311 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 OR5H6Q8NGV6 325 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 CHAC2Q8WUX2 184 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 FAAP24Q9BTP7 215 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 DPM3Q9P2X0 92 aa6.12□□□□□ -1.43
USP16-204ENST00000399976 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 TRAV40A0A0B4J280 105 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 A0A1B0GUS0 222 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 BUB1B-PAK6H3BSN5 160 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 TCF21O43680 179 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 HBZP02008 142 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 ZBTB25P24278 435 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 CDK2P24941 298 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 COMPP49747 757 aaPredicted RBP6.11□□□□□ -1.43
USP16-204ENST00000399976 CLDN12P56749 244 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 TAS2R46P59540 309 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 TAS2R20P59543 309 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 EDDM3AQ14507 147 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 OXA1LQ15070 435 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 MORN2Q502X0 79 aa6.11□□□□□ -1.43
USP16-204ENST00000399976 OR10K2Q6IF99 312 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms