RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 AMY2AP04746 511 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 UCHL1P09936 223 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 OPN1MW2P0DN77 364 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 OPN1MW3P0DN78 364 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 CD28P10747 220 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 SRMP19623 302 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 CRHBPP24387 322 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 EMX1Q04741 257 aaPredicted RBP11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 TPBGQ13641 420 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 TRAM1Q15629 374 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 ABCA11PQ4W5N1 156 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 HSD17B12Q53GQ0 312 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 PRSS48Q7RTY5 328 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 CEACAM19Q7Z692 300 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 OR56B4Q8NH76 319 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 MOB4Q9Y3A3 225 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 HSD17B6O14756 317 aa11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 SNRNP70P08621 437 aaKnown RBP11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 PSMA1P25786 263 aaKnown RBP11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 MLLT11Q13015 90 aaPredicted RBP11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 DIAPH2-AS1Q14236 149 aa11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 DRAM1Q8N682 238 aa11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 MBNL3Q9NUK0 354 aaKnown RBP11.85□□□□□ -0.51
SMIM11A-203ENST00000399299 PLXNB1O43157 2135 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 ADARB2-AS1A8MUL3 147 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 CCRL2O00421 344 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 SLC22A1O15245 554 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 FGF16O43320 207 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 MPIG6BO95866 241 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 LPLP06858 475 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 VSIG8P0DPA2 414 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 IL3RAP26951 378 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 VHLP40337 213 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 ZNF137PP52743 207 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 RPS27AP62979 156 aaKnown RBP11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 EBI3Q14213 229 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 PDLIM3Q53GG5 364 aaPredicted RBP11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 ZNF439Q8NDP4 499 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 OR4K15Q8NH41 348 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 KCNG3Q8TAE7 436 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 UBALD1Q8TB05 177 aa11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
SMIM11A-203ENST00000399299 IGHV3-43A0A0B4J1X8 118 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 TXNL1O43396 289 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 BPNT1O95861 308 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 HBZP02008 142 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 IGHV3-43DP0DP04 118 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 CPEP16870 476 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 RCC1P18754 421 aaPredicted RBP11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 CHATP28329 748 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 HTR2CP28335 458 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 CD83Q01151 205 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 HES1Q14469 280 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 STEAP3Q658P3 488 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 TMEM91Q6ZNR0 172 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 IZUMO1Q8IYV9 350 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 OR5AU1Q8NGC0 362 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 OR6M1Q8NGM8 313 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 ST6GALNAC6Q969X2 333 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 OR4F4Q96R69 305 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 TM2D1Q9BX74 207 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 TMEM59Q9BXS4 323 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 GNG12Q9UBI6 72 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 BLOC1S6Q9UL45 172 aa11.83□□□□□ -0.52
SMIM11A-203ENST00000399299 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 TMEM14DPA8MWL7 114 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 TMEM11P17152 192 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 RPS25P62851 125 aaKnown RBP11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 QRFPP83859 136 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 UNC119Q13432 240 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 OR10K2Q6IF99 312 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 CENPVQ7Z7K6 275 aaPredicted RBP11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 C5orf56Q8N8D9 126 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 MRPL30Q8TCC3 161 aaKnown RBP11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 RTN4IP1Q8WWV3 396 aaPredicted RBP11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 TMEM203Q969S6 136 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 NEDD4LQ96PU5 975 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms