RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 LDLRAD4O15165 306 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 RCC1P18754 421 aaPredicted RBP13.39□□□□□ -0.27
APTR-201ENST00000398043 LTC4SQ16873 150 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 Q6ZPA2 131 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 FAM89BQ8N5H3 189 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 UBALD1Q8TB05 177 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 MRPL30Q8TCC3 161 aaKnown RBP13.39□□□□□ -0.27
APTR-201ENST00000398043 SULT4A1Q9BR01 284 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 NPFFR1Q9GZQ6 430 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 LPAR5Q9H1C0 372 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 PITPNC1Q9UKF7 332 aa13.39□□□□□ -0.27
APTR-201ENST00000398043 FAM90A9PA6NNJ1 464 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 H3BUI4 141 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 CEACAM3P40198 252 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 DIAPH2-AS1Q14236 149 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 P2RY14Q15391 338 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 LINC00311Q8N616 119 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 OR4C13Q8NGP0 309 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 GFOD1Q9NXC2 390 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 V9GY05 133 aa13.38□□□□□ -0.27
APTR-201ENST00000398043 A0A1W2PPI3 338 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 CCRL2O00421 344 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 SDCBPO00560 298 aaPredicted RBP13.37□□□□□ -0.27
APTR-201ENST00000398043 CD24P25063 80 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 GNG10P50151 68 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 Q3ZCU0 254 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 ZNF773Q6PK81 442 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 Q6ZS46 218 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 C6orf201Q7Z4U5 140 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 ZNF554Q86TJ5 538 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 NR2C2APQ86WQ0 139 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 ZNF439Q8NDP4 499 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 CFHR4Q92496 578 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 FCGR1BQ92637 280 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 FAAP24Q9BTP7 215 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
APTR-201ENST00000398043 AMMECR1Q9Y4X0 333 aaPredicted RBP13.37□□□□□ -0.27
APTR-201ENST00000398043 A0A1W2PPE3 182 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 SOCS1O15524 211 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 NAPSAO96009 420 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 HBZP02008 142 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 ARSBP15848 533 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 BRS3P32247 399 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 CLDN12P56749 244 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 OR10A3P58181 314 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 MADCAM1Q13477 382 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 HABP2Q14520 560 aaPredicted RBP13.36□□□□□ -0.27
APTR-201ENST00000398043 RAB11BQ15907 218 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 TRAT1Q6PIZ9 186 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 C5orf24Q7Z6I8 188 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 OR51D1Q8NGF3 324 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 OR1L1Q8NH94 360 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 WIPF2Q8TF74 440 aaPredicted RBP13.36□□□□□ -0.27
APTR-201ENST00000398043 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 FAM3DQ96BQ1 224 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 NEDD4LQ96PU5 975 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 PLGRKTQ9HBL7 147 aa13.36□□□□□ -0.27
APTR-201ENST00000398043 IGHV3-43A0A0B4J1X8 118 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 AMY1AP04745 511 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 AMY2AP04746 511 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 IGHV3-43DP0DP04 118 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 BLVRBP30043 206 aaPredicted RBP13.35□□□□□ -0.27
APTR-201ENST00000398043 FGF9P31371 208 aaPredicted RBP13.35□□□□□ -0.27
APTR-201ENST00000398043 PSMD7P51665 324 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 ZNF134P52741 427 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 TMEM50BP56557 158 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 BLCAPP62952 87 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 ZNF816Q0VGE8 651 aaPredicted RBP13.35□□□□□ -0.27
APTR-201ENST00000398043 PLA2G7Q13093 441 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 TMEM30BQ3MIR4 351 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 NKAPLQ5M9Q1 402 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 ZNF880Q6PDB4 577 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 C11orf88Q6PI97 169 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 C16orf82Q7Z2V1 217 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 THNSL2Q86YJ6 484 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 OR2T6Q8NHC8 308 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 TOMM40LQ969M1 308 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 RPEQ96AT9 228 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
APTR-201ENST00000398043 OCSTAMPQ9BR26 566 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 LIN7BQ9HAP6 207 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 TAF9BQ9HBM6 251 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 STEAP1Q9UHE8 339 aa13.35□□□□□ -0.27
APTR-201ENST00000398043 TMEM272A0A1B0GTI8 110 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 TIMM23O14925 209 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 SLC31A2O15432 143 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 SPINT2O43291 252 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 PSMB9P28065 219 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 MNDAP41218 407 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 ARHGDIBP52566 201 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 ZNF137PP52743 207 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 HMGN3Q15651 99 aa13.34□□□□□ -0.27
APTR-201ENST00000398043 CT45A1Q5HYN5 189 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms