RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 PRDM6Q9NQX0 595 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 P4HTMQ9NXG6 502 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 NXT1Q9UKK6 140 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 MCTS1Q9ULC4 181 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 HSF4Q9ULV5 492 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 B3GALT1Q9Y5Z6 326 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 CHCHD2Q9Y6H1 151 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 A0A0G2JMM0 328 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 IGHV3-64DA0A0J9YX35 117 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 A0A1B0GU03 582 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 A0A1W2PPB8 328 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 A0A1W2PRS3 328 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ZNF850A8MQ14 1090 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 CEACAM18A8MTB9 384 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 KIR3DP1A8MWS1 328 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 CCL25O15444 150 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 XRCC2O43543 280 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TNFSF13O75888 250 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 HPNP05981 417 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TDGF1P13385 188 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TFPI2P48307 235 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 RPL23AP62750 156 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 CCL20P78556 96 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 P2RY6Q15077 328 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TMEM183BQ1AE95 376 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ACOT6Q3I5F7 207 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 PHLDA2Q53GA4 152 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 VAX1Q5SQQ9 334 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ZNF880Q6PDB4 577 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 TGIF2LYQ8IUE0 185 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 OR2G3Q8NGZ4 309 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 RBMXL1Q96E39 390 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 OXGR1Q96P68 337 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 RTBDNQ9BSG5 229 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 ULBP2Q9BZM5 246 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 WFDC1Q9HC57 220 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 SEPSECSQ9HD40 501 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 AK3Q9UIJ7 227 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 EXPH5Q8NEV8 1989 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 M0R135 149 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 TUBG1P23258 451 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 OTX2P32243 289 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 NTF4P34130 210 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 PIGYQ3MUY2 71 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 SLC23A3Q6PIS1 610 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 VASH2Q86V25 355 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 OR10G4Q8NGN3 311 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 TMEM170AQ8WVE7 144 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 ZNF799Q96GE5 643 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 RPH3ALQ9UNE2 315 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 LAMP3Q9UQV4 416 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 C14orf166Q9Y224 244 aaKnown RBP4.34□□□□□ -1.72
SSR1-202ENST00000397511 MRPS17Q9Y2R5 130 aaKnown RBP4.34□□□□□ -1.72
SSR1-202ENST00000397511 SIT1Q9Y3P8 196 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 ESPL1Q14674 2120 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 KIAA2026Q5HYC2 2103 aa4.34□□□□□ -1.72
SSR1-202ENST00000397511 EP300Q09472 2414 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 AQP7O14520 342 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 HBE1P02100 147 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 RFPL3SP0C7P2 107 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CD46P15529 392 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 HTD2P86397 168 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 FAM189A2Q15884 450 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 IGFBP7Q16270 282 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 RSPO1Q2MKA7 263 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 LYSMD4Q5XG99 296 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SPSB3Q6PJ21 355 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SLC25A47Q6Q0C1 308 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 VHLLQ6RSH7 139 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR1L6Q8NGR2 347 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 EMG1Q92979 244 aaKnown RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 MS4A10Q96PG2 267 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PARD6GQ9BYG4 376 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 CHRNA10Q9GZZ6 450 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 BDP1A6H8Y1 2624 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 YLPM1P49750 1951 aaKnown RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 RELNP78509 3460 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PRR14LQ5THK1 2151 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 A0A096LPE4 126 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 LY6G6EA0A0G2JKS1 128 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 A0A0J9YW62 118 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 A0A1W2PPZ6 126 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 AQP7P3A6NL99 342 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ETV2O00321 342 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 TLX3O43711 291 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 MSR1P21757 451 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 DUSP1P28562 367 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 EPHA8P29322 1005 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 RAB11AP62491 216 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ENDOGQ14249 297 aaKnown RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 DOK3Q7L591 496 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms