RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 IGLV1-47P01700 117 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 HTR1DP28221 377 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 NCS1P62166 190 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 SSX2Q16385 188 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 PLA1AQ53H76 456 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 DYNAPQ8N1N2 210 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 OR9G1Q8NH87 305 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 OR1L1Q8NH94 360 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 RAB3CQ96E17 227 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 MALSU1Q96EH3 234 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 HDHD3Q9BSH5 251 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 MEGF9Q9H1U4 602 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 TAF9BQ9HBM6 251 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 RAB9BQ9NP90 201 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 KCNIP1Q9NZI2 227 aa17.16■□□□□ 0.34
TSPAN4-206ENST00000397408 METTL21EPA6NDL7 271 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 H3BUX3 64 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 NAPSAO96009 420 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 HBZP02008 142 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 TFAP2AP05549 437 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 ALDH3B2P48448 385 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 GNG10P50151 68 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 PRRX1P54821 245 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 LRRC75BQ2VPJ9 315 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 HLA-DRB5Q30154 266 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 C16orf87Q6PH81 154 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 OR10R2Q8NGX6 335 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 SSX3Q99909 188 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 ATG5Q9H1Y0 275 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 HILPDAQ9Y5L2 63 aa17.15■□□□□ 0.34
TSPAN4-206ENST00000397408 IGHV3-43A0A0B4J1X8 118 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 RAB27BO00194 218 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 F2RL2O00254 374 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 IGHV3-43DP0DP04 118 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 RPS19P39019 145 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 SERPINB10P48595 397 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 VBP1P61758 197 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 OLFML2AQ68BL7 652 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 Q6ZPA2 131 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 SLC16A12Q6ZSM3 486 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 GPR141Q7Z602 305 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 OR52M1Q8NGK5 317 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 OR5R1Q8NH85 324 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 SETD6Q8TBK2 473 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 NAA50Q9GZZ1 169 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 MMP28Q9H239 520 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 C12orf4Q9NQ89 552 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 GFOD1Q9NXC2 390 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 PSG11Q9UQ72 335 aa17.14■□□□□ 0.33
TSPAN4-206ENST00000397408 J3QR06 171 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 LOXL3P58215 753 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 TMEM30BQ3MIR4 351 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 GPR107Q5VW38 600 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 FAM53AQ6NSI3 398 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 MOB1BQ7L9L4 216 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 C5orf24Q7Z6I8 188 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 ZNF554Q86TJ5 538 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 ANKRD13BQ86YJ7 626 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 CMSS1Q9BQ75 279 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 RIMS4Q9H426 269 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 DPM3Q9P2X0 92 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 GNG12Q9UBI6 72 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 VPREB3Q9UKI3 123 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 A0A075B6Q4 140 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 BUB1B-PAK6H3BSN5 160 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 GABARAPO95166 117 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 HIST1H1DP16402 221 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 GNB3P16520 340 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 SCAND1P57086 179 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 HMGN3Q15651 99 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 AANATQ16613 207 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 ZNF880Q6PDB4 577 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 CROCCP3Q8IVE0 287 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 OR5H6Q8NGV6 325 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 RHBDL2Q9NX52 303 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 KCNK7Q9Y2U2 307 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 ETV7Q9Y603 341 aa17.13■□□□□ 0.33
TSPAN4-206ENST00000397408 TRBV6-6A0A0A6YYG2 114 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 A0A1W2PPE3 182 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 FAM181BA6NEQ2 426 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 VGLL3A8MV65 326 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 LEUTXA8MZ59 168 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 MFNGO00587 321 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 GPR137BO60478 399 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 OR10V1Q8NGI7 309 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 CREB3L1Q96BA8 519 aa17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 AMMECR1Q9Y4X0 333 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-206ENST00000397408 TMEM127O75204 238 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 CD3GP09693 182 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 CEACAM3P40198 252 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 MRPS15P82914 257 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 LY6EQ16553 131 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 CTF1Q16619 201 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 TAF15Q92804 592 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 GCDHQ92947 438 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 SLC25A38Q96DW6 304 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 OR2S2Q9NQN1 319 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 ABRACLQ9P1F3 81 aa17.11■□□□□ 0.33
TSPAN4-206ENST00000397408 STAB1Q9NY15 2570 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms