RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GAPDHP04406 335 aaKnown RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 HSMCR30P0CW71 290 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 HTR2CP28335 458 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 VHLP40337 213 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 ZNF816Q0VGE8 651 aaPredicted RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 SYT6Q5T7P8 510 aaPredicted RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 LRRTM1Q86UE6 522 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 TMEM104Q8NE00 496 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 RFESDQ8TAC1 157 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 FAM110DQ8TAY7 271 aaPredicted RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 NEDD4LQ96PU5 975 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 MGLLQ99685 303 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 BANF2Q9H503 90 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 KCNIP1Q9NZI2 227 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 FBXO24O75426 580 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 VSIG10L2P0DP72 767 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 GABARAPL2P60520 117 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
SEC13-204ENST00000397099 ZNF367Q7RTV3 350 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 OR2W3Q7Z3T1 314 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 CNBD2Q96M20 576 aa11.16□□□□□ -0.62
SEC13-204ENST00000397099 URM1Q9BTM9 101 aaKnown RBP11.16□□□□□ -0.62
SEC13-204ENST00000397099 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
SEC13-204ENST00000397099 MBNL3Q9NUK0 354 aaKnown RBP11.16□□□□□ -0.62
SEC13-204ENST00000397099 SLC17A2O00624 439 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 FGF16O43320 207 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 RGS11O94810 467 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 MPIG6BO95866 241 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 VSIG8P0DPA2 414 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 ARSBP15848 533 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 GALP22466 123 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 GNG10P50151 68 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 GP2P55259 537 aaKnown RBP11.15□□□□□ -0.62
SEC13-204ENST00000397099 LOXL3P58215 753 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 BLCAPP62952 87 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 HTD2P86397 168 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 HABP2Q14520 560 aaPredicted RBP11.15□□□□□ -0.62
SEC13-204ENST00000397099 LTC4SQ16873 150 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 NDUFA11Q86Y39 141 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 SVOPQ8N4V2 548 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 CCDC107Q8WV48 283 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 TM2D1Q9BX74 207 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 ZNF581Q9P0T4 197 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 MGAT4AQ9UM21 535 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
SEC13-204ENST00000397099 A0A1W2PPI3 338 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 C12orf77C9JDV5 145 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 HSD17B6O14756 317 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OPN1MWP04001 364 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OPN1MW2P0DN77 364 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OPN1MW3P0DN78 364 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 ZNF137PP52743 207 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 INSL4Q14641 139 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 LY6G6FQ5SQ64 297 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 TMEM91Q6ZNR0 172 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OR4F17Q8NGA8 305 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OR56B4Q8NH76 319 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
SEC13-204ENST00000397099 SGCDQ92629 289 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 FAM46BQ96A09 425 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 YTHDF1Q9BYJ9 559 aaKnown RBP11.14□□□□□ -0.63
SEC13-204ENST00000397099 PLGRKTQ9HBL7 147 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
SEC13-204ENST00000397099 TRAV39A0A0B4J263 110 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 TMEM14DPA8MWL7 114 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 HBZP02008 142 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 TMEM11P17152 192 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 JUNBP17275 347 aaPredicted RBP11.13□□□□□ -0.63
SEC13-204ENST00000397099 CALRP27797 417 aaKnown RBP11.13□□□□□ -0.63
SEC13-204ENST00000397099 CHATP28329 748 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 CD1BP29016 333 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 HES1Q14469 280 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 ABCA11PQ4W5N1 156 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 SIGIRRQ6IA17 410 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 SLC25A48Q6ZT89 311 aaKnown RBP11.13□□□□□ -0.63
SEC13-204ENST00000397099 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
SEC13-204ENST00000397099 IZUMO1Q8IYV9 350 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 DRAM1Q8N682 238 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 C11orf44Q8N8P7 122 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 OR4K15Q8NH41 348 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 GALMQ96C23 342 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 TAF9BQ9HBM6 251 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
SEC13-204ENST00000397099 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 UBE2QL1A1L167 161 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms