RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SPRNQ5BIV9 151 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 PRAMEF6Q5VXH4 476 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 TMEM200AQ86VY9 491 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 C11orf53Q8IXP5 236 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 CLRN3Q8NCR9 226 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 Q96M66 194 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 OR5AC2Q9NZP5 309 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 DYSFO75923 2080 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 MSGN1A6NI15 193 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 PLATP00750 562 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 GLRA1P23415 457 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 NKAPLQ5M9Q1 402 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 ERGIC1Q969X5 290 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 METTL8Q9H825 291 aaKnown RBP12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 LAMP3Q9UQV4 416 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
TM9SF1-202ENST00000396854 IGKV1-12A0A0C4DH73 117 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 CDIPTO14735 213 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 IGKV1D-12P01611 117 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 TNFRSF1AP19438 455 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 RSU1Q15404 277 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 BOLLQ8N9W6 283 aaKnown RBP12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 OR51F2Q8NH61 342 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 IGFBPL1Q8WX77 278 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 EGLN1Q9GZT9 426 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 SLC5A7Q9GZV3 580 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 ELL3Q9HB65 397 aaPredicted RBP12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 SYNGR1O43759 233 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 RHBDL1O75783 438 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 CCL8P80075 99 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 RAB32Q13637 225 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 C10orf91Q5T1B1 145 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 WDR82Q6UXN9 313 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 Q8NFD4 153 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 TMED6Q8WW62 240 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 MAFIPQ8WZ33 124 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 SAP30LQ9HAJ7 183 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 GCM1Q9NP62 436 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 C14orf166Q9Y224 244 aaKnown RBP12.47□□□□□ -0.41
TM9SF1-202ENST00000396854 IGHV3-64DA0A0J9YX35 117 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 A6NLC8 198 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 TSPAN9O75954 239 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 CFHR2P36980 270 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 SVBPQ8N300 66 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 OR10Z1Q8NGY1 313 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 Q8TCH9 128 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 POM121Q96HA1 1249 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 RHOFQ9HBH0 211 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 PCDHB16Q9NRJ7 776 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 DECR2Q9NUI1 292 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
TM9SF1-202ENST00000396854 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 IFNA2P01563 188 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 PGA5P0DJD9 388 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 ADCYAP1P18509 176 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 ARHGDIBP52566 201 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 IL34Q6ZMJ4 242 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 MOGAT3Q86VF5 341 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 SLAMF9Q96A28 289 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 RAB1BQ9H0U4 201 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF701Q9NV72 531 aaPredicted RBP12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 C1orf123Q9NWV4 160 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 LPAR3Q9UBY5 353 aa12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.42
TM9SF1-202ENST00000396854 OVOL3O00110 214 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 TAAR5O14804 337 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 SFTPBP07988 381 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 PMELP40967 661 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 ERVK11-1P61568 191 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 EIF5AP63241 154 aaKnown RBP12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF826PQ6ZT77 177 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 Q8IYB0 196 aa12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 PUSL1Q8N0Z8 303 aaKnown RBP12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 SAT2Q96F10 170 aaPredicted RBP12.45□□□□□ -0.42
TM9SF1-202ENST00000396854 IGKV1D-8A0A087WSZ0 117 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 TRAPPC2LH3BP13 241 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 GPR31O00270 319 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 CTSDP07339 412 aaPredicted RBP12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 BCL3P20749 454 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 RBMXP38159 391 aaKnown RBP12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 NPBWR2P48146 333 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms