RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 WNT16Q9UBV4 365 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 PDCD6O75340 191 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 GPR3P46089 330 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TRPM7Q96QT4 1865 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 PAGE4O60829 102 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 MPDU1O75352 247 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 OR4A8P0C604 315 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 CD27P26842 260 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ANKRD34AQ69YU3 496 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ZFPL1O95159 310 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TNFAIP6P98066 277 aaPredicted RBP9.14□□□□□ -0.95
COL4A4-201ENST00000396625 BAHD1Q8TBE0 780 aaPredicted RBP9.14□□□□□ -0.95
COL4A4-201ENST00000396625 LRRC29Q8WV35 223 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 RAB1BQ9H0U4 201 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 RNF186Q9NXI6 227 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV6-21A0A0C4DH24 114 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM189-UBE2V1I3L0A0 370 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 ZGLP1P0C6A0 271 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 OR5A1Q8NGJ0 315 aa9.14□□□□□ -0.95
COL4A4-201ENST00000396625 CHST1O43916 411 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 WNT5AP41221 380 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 CCR5P51681 352 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 INSL4Q14641 139 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 GHITMQ9H3K2 345 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 Q8WTZ3 238 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 BCORQ6W2J9 1755 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PTOV1Q86YD1 416 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 GEMIN7Q9H840 131 aaKnown RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 HELZP42694 1942 aaKnown RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 CACNA1HO95180 2353 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 ABLIM3O94929 683 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 FOLR2P14207 255 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 SLC25A30Q5SVS4 291 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 C9orf62Q8N4C0 152 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 C7orf71A4D174 169 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 BCL2P10415 239 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 KRTCAP3Q53RY4 240 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 MRPL43Q8N983 215 aaKnown RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 OR8G5Q8NG78 346 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 ALG1L2C9J202 215 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 UPK1AO00322 258 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 MPLP40238 635 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 MEIG1Q5JSS6 88 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 UBALD2Q8IYN6 164 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 SIRT5Q9NXA8 310 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PRR13Q9NZ81 148 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 TBX21Q9UL17 535 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF324BQ6AW86 544 aaPredicted RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 GVQW1Q8N7I0 195 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 GMPPAQ96IJ6 420 aaPredicted RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 SOSTQ9BQB4 213 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 MAP1LC3AQ9H492 121 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PRNDQ9UKY0 176 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 NDUFS8O00217 210 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PLPP2O43688 288 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 PRKNO60260 465 aaPredicted RBP9.13□□□□□ -0.95
COL4A4-201ENST00000396625 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 P2RX4Q99571 388 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 MTCH2Q9Y6C9 303 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 RALGAPA2Q2PPJ7 1873 aa9.13□□□□□ -0.95
COL4A4-201ENST00000396625 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 EPHA8P29322 1005 aaPredicted RBP9.12□□□□□ -0.95
COL4A4-201ENST00000396625 PMELP40967 661 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 RAC3P60763 192 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 FMODQ06828 376 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 C2orf83Q53S99 150 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 TEPPQ6URK8 271 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF665Q9H7R5 613 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 A8MWL6 223 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 H0Y8X5 98 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 GFYI3L273 518 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 CA10Q9NS85 328 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 SCAND1P57086 179 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 B4GALNT1Q00973 533 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 LOXL2Q9Y4K0 774 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 C10orf128Q5T292 105 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 CDS2O95674 445 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 OR10D3Q8NH80 312 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 MZB1Q8WU39 189 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 PARP11Q9NR21 331 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 KCNMB2Q9Y691 235 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 C1QTNF9BB2RNN3 333 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 FZD5Q13467 585 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 FAM209AQ5JX71 171 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 KIRREL2Q6UWL6 708 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 DEFB103AP81534 67 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 KCNMB1Q16558 191 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms