RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PRSS50Q9UI38 385 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 DOCK8Q8NF50 2099 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1W2PNV4 684 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 RPL36A-HNRNPH2H7BZ11 118 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 AP4M1O00189 453 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 ISG15P05161 165 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 MMP9P14780 707 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 DAOP14920 347 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 ERVFRD-1P60508 538 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 ZXDAP98168 799 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 VWA1Q6PCB0 445 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 SHISA5Q8N114 240 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 OR4P4Q8NGL7 312 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 OR10D4PQ8NGN7 298 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 ZDHHC8Q9ULC8 765 aa4.78□□□□□ -1.65
VPS13C-204ENST00000395898 MGAMO43451 1857 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SCN5AQ14524 2016 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 K7N7A8 449 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 IGF2P01344 180 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 C1QAP02745 245 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SULT1A1P50225 295 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 GAMTQ14353 236 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PLPPR5Q32ZL2 321 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 DHRS11Q6UWP2 260 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TOMM20LQ6UXN7 152 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 MYOZ3Q8TDC0 251 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 LOC285556D6RIA3 1793 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TRBV5-3A0A0A0MS03 114 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ERGP11308 486 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 HOXB1P14653 301 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ID1P41134 155 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ASCL1P50553 236 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 DOK5Q9P104 306 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 UFC1Q9Y3C8 167 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 LIPGQ9Y5X9 500 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PPIAL4EA0A075B759 164 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PPIAL4DF5H284 164 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 M0R143 59 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ADAP1O75689 374 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PPIAL4FP0DN26 164 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 FAM209AQ5JX71 171 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 HSD17B13Q7Z5P4 300 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OR4D11Q8NGI4 311 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 MRGPRFQ96AM1 343 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SLC25A33Q9BSK2 321 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 DDA1Q9BW61 102 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 AP5S1Q9NUS5 200 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PPIAL4AQ9Y536 164 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 STAG3L2P0CL84 134 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ACAA2P42765 397 aaKnown RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 CEACAM21Q3KPI0 293 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 LBHQ53QV2 105 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 CLEC2AQ6UVW9 174 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 MRPL37Q9BZE1 423 aaKnown RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PQF6 199 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 FGF12P61328 243 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TFF2Q03403 129 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SRSF5Q13243 272 aaKnown RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PIGYQ3MUY2 71 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 Q6ZN92 141 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OR10A7Q8NGE5 316 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OPN4Q9UHM6 478 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SPINK4O60575 86 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 KLF7O75840 302 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PRSS1P07477 247 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 SEC11BP0C7V7 166 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 CLDN18P56856 261 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 EIF4EBP2Q13542 120 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 HIKESHIQ53FT3 197 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF645Q8N7E2 425 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ALX4Q9H161 411 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 KMT2EQ8IZD2 1858 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 FAM157AC9JC47 383 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 IGHV3-13P01766 116 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 IGHV3-7P01780 117 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 KIR3DL2P43630 455 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 UCP2P55851 309 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TMPRSS3P57727 454 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OR4D10Q8NGI6 311 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF519Q8TB69 540 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 FGF11Q92914 225 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 IL19Q9UHD0 177 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 WASHC3Q9Y3C0 194 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 IGHV1-45A0A0A0MS14 117 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 PITX3O75364 302 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 EML2O95834 649 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 HPRT1P00492 218 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 FGF8P55075 233 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 AESQ08117 197 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 VAX1Q5SQQ9 334 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TSPO2Q5TGU0 170 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 CALHM1Q8IU99 346 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 H1FOOQ8IZA3 346 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-204ENST00000395898 STPG3Q8N7X2 389 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OR4X1Q8NH49 305 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF501Q96CX3 271 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms