RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 NDRG3Q9UGV2 375 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 KNTC1P50748 2209 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 DCHS2Q6V1P9 2916 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 A0A1B0GW64 132 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 LRP5LA4QPB2 252 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 NXPH3O95157 252 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 PAX6P26367 422 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 ATP6V0CP27449 155 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 APLNRP35414 380 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 TRIP6Q15654 476 aaKnown RBP12.97□□□□□ -0.33
CPSF7-202ENST00000394888 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 ESRP2Q9H6T0 727 aaKnown RBP12.97□□□□□ -0.33
CPSF7-202ENST00000394888 FAM86C1Q9NVL1 165 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 INTS1Q8N201 2190 aaKnown RBP12.97□□□□□ -0.33
CPSF7-202ENST00000394888 KIR2DS1A0A191URI9 304 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 LYZL6O75951 148 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 VDAC1P21796 283 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 KIR2DS4P43632 304 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 PPP1CBP62140 327 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 KIR2DS1Q14954 304 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
CPSF7-202ENST00000394888 TET2Q6N021 2002 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-202ENST00000394888 J3QW42 95 aa12.96□□□□□ -0.33
CPSF7-202ENST00000394888 ACAA1P09110 424 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-202ENST00000394888 CD46P15529 392 aa12.96□□□□□ -0.33
CPSF7-202ENST00000394888 SMCO1Q147U7 214 aa12.96□□□□□ -0.33
CPSF7-202ENST00000394888 SLC25A40Q8TBP6 338 aa12.96□□□□□ -0.33
CPSF7-202ENST00000394888 ANKRD30BLA7E2S9 258 aa12.96□□□□□ -0.34
CPSF7-202ENST00000394888 CGAP01215 116 aa12.96□□□□□ -0.34
CPSF7-202ENST00000394888 NKX2-1P43699 371 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-202ENST00000394888 HSD17B11Q8NBQ5 300 aa12.96□□□□□ -0.34
CPSF7-202ENST00000394888 RARRES2Q99969 163 aa12.96□□□□□ -0.34
CPSF7-202ENST00000394888 ERRFI1Q9UJM3 462 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-202ENST00000394888 FAM186AA6NE01 2351 aa12.96□□□□□ -0.34
CPSF7-202ENST00000394888 CEACAM1P13688 526 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 DYNLT3P51808 116 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 SRPXP78539 464 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 IGHV3-64DA0A0J9YX35 117 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 WNT9BO14905 357 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 TXNL1O43396 289 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
CPSF7-202ENST00000394888 Q6ZT83 130 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 FAM212BQ9NTI7 297 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-202ENST00000394888 CHST1O43916 411 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 TNFSF13O75888 250 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 UBALD1Q8TB05 177 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 TOLLIPQ9H0E2 274 aa12.95□□□□□ -0.34
CPSF7-202ENST00000394888 CDIPTO14735 213 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 SNAPINO95295 136 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 SLC25A6P12236 298 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 RUNX1Q01196 453 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 GUK1Q16774 197 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 TMEM182Q6ZP80 229 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-202ENST00000394888 OR10Z1Q8NGY1 313 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 COQ2Q96H96 371 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 AIFM2Q9BRQ8 373 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 RIMS4Q9H426 269 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-202ENST00000394888 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 DEGS1O15121 323 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 IGLV1-44P01699 117 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 PLP2Q04941 152 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 IL22RA1Q8N6P7 574 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 KLF14Q8TD94 323 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-202ENST00000394888 TAAR6Q96RI8 345 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 CTXN2P0C2S0 81 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 HAGHQ16775 308 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 EIF5AL1Q6IS14 154 aaKnown RBP12.94□□□□□ -0.34
CPSF7-202ENST00000394888 ZNF695Q8IW36 515 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 CLCC1Q96S66 551 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 SPACA1Q9HBV2 294 aa12.94□□□□□ -0.34
CPSF7-202ENST00000394888 SIRPB1O00241 398 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 AGFG2O95081 481 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 FOLR2P14207 255 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 AKR1C3P42330 323 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 ARG2P78540 354 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 HABP2Q14520 560 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-202ENST00000394888 CLINT1Q14677 625 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 FAM214BQ7L5A3 538 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 OR5C1Q8NGR4 320 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 ZFP57Q9NU63 452 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 UBE2J1Q9Y385 318 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-202ENST00000394888 CST7O76096 145 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 CRYBA1P05813 215 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 MMP9P14780 707 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 RAC2P15153 192 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 SPRNQ5BIV9 151 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 SPIN3Q5JUX0 258 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 OR10V1Q8NGI7 309 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 FBXO9Q9UK97 447 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-202ENST00000394888 PRELID3BQ9Y3B1 194 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 TANC2Q9HCD6 1990 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 DIDO1Q9BTC0 2240 aaKnown RBP12.93□□□□□ -0.34
CPSF7-202ENST00000394888 DSCAMO60469 2012 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-202ENST00000394888 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
CPSF7-202ENST00000394888 ZNF826PQ6ZT77 177 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms