RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CALHM2Q9HA72 323 aa8.59□□□□□ -1.03
UBE2D3-208ENST00000394803 TRIOO75962 3097 aa8.59□□□□□ -1.03
UBE2D3-208ENST00000394803 OR5H1A6NKK0 313 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 MBP02144 154 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 CXCL1P09341 107 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 EPHA1P21709 976 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 CYB561P49447 251 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 GNG3P63215 75 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 HERPUD1Q15011 391 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 OR2T2Q6IF00 324 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ODF3L1Q8IXM7 274 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 RCC1LQ96I51 464 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 STRADBQ9C0K7 418 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 PSENENQ9NZ42 101 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 NAT8Q9UHE5 227 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 PITPNC1Q9UKF7 332 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ASCC3Q8N3C0 2202 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 TNRC6AQ8NDV7 1962 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 NTN3O00634 580 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM50AO95807 157 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 NTF4P34130 210 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ERVFRD-1P60508 538 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ARF1P84077 181 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 DAZAP2Q15038 168 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ATP6V1FQ16864 119 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 LRRC75BQ2VPJ9 315 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 WIPI1Q5MNZ9 446 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF324BQ6AW86 544 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 P4HA3Q7Z4N8 544 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 FAM58AQ8N1B3 248 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 CPEB3Q8NE35 698 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 MTCH1Q9NZJ7 389 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 URGCP-MRPS24S4R325 110 aa8.58□□□□□ -1.04
UBE2D3-208ENST00000394803 TGIF2-C20orf24A0A0A6YYL0 155 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 C5orf49A4QMS7 147 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 LRRC3CA6NJW4 275 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZFP92A6NM28 416 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 CCNOP22674 350 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 GFRA1P56159 465 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PRSS12P56730 875 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZFP36L1Q07352 338 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PYY3Q5JQD4 70 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PCSK4Q6UW60 755 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 OR5P3Q8WZ94 311 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 SMCO3A2RU48 225 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 B4E171 279 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 J3QW42 95 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 SS18L1O75177 396 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 TRGC2P03986 189 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 SERPINA7P05543 415 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PSG2P11465 335 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 HOXA6P31267 233 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 TSPAN7P41732 249 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 SSTP61278 116 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PKIAP61925 76 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 MSMO1Q15800 293 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF343Q6P1L6 599 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 TGIF2LYQ8IUE0 185 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF525Q8N782 197 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF383Q8NA42 475 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ZBTB34Q8NCN2 500 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 NANOS1Q8WY41 292 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 OR5B12Q96R08 314 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 CDX2Q99626 313 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM9BQ9NQ34 198 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ABI3Q9P2A4 366 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 ERRFI1Q9UJM3 462 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 PILRBQ9UKJ0 227 aa8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 RBM7Q9Y580 266 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-208ENST00000394803 IGKV1-6A0A0C4DH72 117 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 MAP1LC3B2A6NCE7 125 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 J3QT63 122 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 SOX15O60248 233 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 LY86O95711 162 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 CER1O95813 267 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 PSMB3P49720 205 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM267Q0VDI3 215 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 SSPNQ14714 243 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 CYP2G1PQ6ZSU1 146 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 DEFB123Q8N688 67 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 OR10A7Q8NGE5 316 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 OR51H1Q8NH63 302 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 OR5R1Q8NH85 324 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 ABHD3Q8WU67 409 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 GUCD1Q96NT3 240 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 FAM173AQ9BQD7 235 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms