RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ARSJQ5FYB0 599 aaPredicted RBP9.58□□□□□ -0.88
CUX1-204ENST00000393824 RIPPLY2Q5TAB7 128 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 DOK3Q7L591 496 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 TGIF2LYQ8IUE0 185 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 TMEM171Q8WVE6 324 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 REEP6Q96HR9 211 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 LIME1Q9H400 295 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 METTL7AQ9H8H3 244 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 PLEKHF2Q9H8W4 249 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 ZNF701Q9NV72 531 aaPredicted RBP9.58□□□□□ -0.88
CUX1-204ENST00000393824 MCTS1Q9ULC4 181 aaKnown RBP9.58□□□□□ -0.88
CUX1-204ENST00000393824 VDAC3Q9Y277 283 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 MSRB2Q9Y3D2 182 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 IGKV1-9A0A0C4DH69 117 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 KIR2DL5BA0A0G2JN68 375 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 KIR2DL5BA0A0G2JPC4 375 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 CCKARP32238 428 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 TLE3Q04726 772 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 HERPUD1Q15011 391 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 KCNMB1Q16558 191 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 DEFB109BQ30KR1 87 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 KIR2DL5AQ8N109 375 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 FDCSPQ8NFU4 85 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 KCNE4Q8WWG9 221 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 TMEM18Q96B42 140 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 DDIT4LQ96D03 193 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 MRPL13Q9BYD1 178 aaKnown RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 CALHM2Q9HA72 323 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 KALRNO60229 2985 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 IGSF23A1L1A6 192 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 CDS2O95674 445 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 OR4A8P0C604 315 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ZNF728P0DKX0 622 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 CDKN1BP46527 198 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 CCL11P51671 97 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ABCA11PQ4W5N1 156 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ZNF880Q6PDB4 577 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 TEX38Q6PEX7 206 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 CRIP3Q6Q6R5 217 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 C1QL2Q7Z5L3 287 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ABHD12BQ7Z5M8 362 aaPredicted RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 ZNF573Q86YE8 665 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 OR2AJ1Q8NGZ0 328 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ZNF552Q9H707 407 aaPredicted RBP9.57□□□□□ -0.88
CUX1-204ENST00000393824 CBLN4Q9NTU7 201 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ALKBH4Q9NXW9 302 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 ACACBO00763 2458 aa9.57□□□□□ -0.88
CUX1-204ENST00000393824 PPP5D1E7EU14 171 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 EFNA2O43921 213 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 OPN1LWP04000 364 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 RFPL3SP0C7P2 107 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 RAB11AP62491 216 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 POU3F1Q03052 451 aaPredicted RBP9.56□□□□□ -0.88
CUX1-204ENST00000393824 KISS1Q15726 138 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 FBXW9Q5XUX1 488 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 CMTM1Q8IZ96 169 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 TMEM252Q8N6L7 170 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 LYRM2Q9NU23 88 aaPredicted RBP9.56□□□□□ -0.88
CUX1-204ENST00000393824 SLC7A11Q9UPY5 501 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
CUX1-204ENST00000393824 C17orf67Q0P5P2 114 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 WDFY1Q8IWB7 410 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 H1FOOQ8IZA3 346 aaPredicted RBP9.56□□□□□ -0.88
CUX1-204ENST00000393824 SLC24A4Q8NFF2 622 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 OR8B12Q8NGG6 310 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 TMEM170AQ8WVE7 144 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 FER1L6-AS2Q96M78 137 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 P2RX4Q99571 388 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 SLC2A9Q9NRM0 540 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 NECAP2Q9NVZ3 263 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 LRFN1Q9P244 771 aa9.56□□□□□ -0.88
CUX1-204ENST00000393824 A6NNC1 897 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 K7EM74 188 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 CST2P09228 141 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 CTSSP25774 331 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 OR3A1P47881 315 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 CYB561P49447 251 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 GRB2P62993 217 aaKnown RBP9.55□□□□□ -0.88
CUX1-204ENST00000393824 ZNF774Q6NX45 483 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 CENPVQ7Z7K6 275 aaPredicted RBP9.55□□□□□ -0.88
CUX1-204ENST00000393824 SPACA3Q8IXA5 215 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 OR5C1Q8NGR4 320 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 ABHD14BQ96IU4 210 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 ZNF319Q9P2F9 582 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 LHFPL6Q9Y693 200 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 NCKAP5O14513 1909 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 LRRC3CA6NJW4 275 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 LIPT2A6NK58 231 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 MSTNO14793 375 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 TMEM225BP0DP42 221 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 BCL2P10415 239 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 BIDP55957 195 aa9.55□□□□□ -0.88
CUX1-204ENST00000393824 BAXQ07812 192 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms