RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 HOXA6P31267 233 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 GPM6AP51674 278 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 CEBPGP53567 150 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 ARF1P84077 181 aaKnown RBP8.53□□□□□ -1.04
COL17A1-203ENST00000393211 LRRC75BQ2VPJ9 315 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 ZNF343Q6P1L6 599 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 ZNF573Q86YE8 665 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 OR10V1Q8NGI7 309 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 PSMF1Q92530 271 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 BCL2L14Q9BZR8 327 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 FGF23Q9GZV9 251 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-203ENST00000393211 RPRMQ9NS64 109 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 GFOD1Q9NXC2 390 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 GNG13Q9P2W3 67 aa8.53□□□□□ -1.04
COL17A1-203ENST00000393211 CD300LBA8K4G0 201 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-203ENST00000393211 TRAPPC6AO75865 159 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 IGFBP4P22692 258 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 RAB11AP62491 216 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 WIPI1Q5MNZ9 446 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-203ENST00000393211 ZNF525Q8N782 197 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 CA5BP1Q8WTZ4 195 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 OR5P3Q8WZ94 311 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 PILRBQ9UKJ0 227 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 CABIN1Q9Y6J0 2220 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 MED12Q93074 2177 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 ARID1AO14497 2285 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 DNAH14Q0VDD8 3507 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 CACNA1EQ15878 2313 aa8.52□□□□□ -1.05
COL17A1-203ENST00000393211 A0A0G2JMM0 328 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 A0A0G2JRQ6 117 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 A0A1W2PPB8 328 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 A0A1W2PRS3 328 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 OR5H1A6NKK0 313 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 RNF212BA8MTL3 300 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 KIR3DP1A8MWS1 328 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TRGC2P03986 189 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 RFPL3SP0C7P2 107 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 GDF1P27539 372 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 GNG3P63215 75 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 DEFA6Q01524 100 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 OR2T2Q6IF00 324 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 SPNS3Q6ZMD2 512 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 CENPVQ7Z7K6 275 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 FAM58AQ8N1B3 248 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ZNF383Q8NA42 475 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 RNASE11Q8TAA1 199 aaKnown RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ABHD3Q8WU67 409 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 LIN7CQ9NUP9 197 aaKnown RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PSENENQ9NZ42 101 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 BOKQ9UMX3 212 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 URGCP-MRPS24S4R325 110 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TRAV24A0A0B4J272 114 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 C5orf49A4QMS7 147 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 B4E171 279 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PHOX2AO14813 284 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 SERPINA7P05543 415 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PSG2P11465 335 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TSPAN7P41732 249 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 CYB561P49447 251 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PKIAP61925 76 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ATP6V1FQ16864 119 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PMS2CLQ68D20 193 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 P4HA3Q7Z4N8 544 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PPP1R32Q7Z5V6 425 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TGIF2LYQ8IUE0 185 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 Q8IYB0 196 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 TDHQ8IZJ6 230 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ABHD5Q8WTS1 349 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 HS3ST6Q96QI5 342 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 PYGO2Q9BRQ0 406 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 WDR61Q9GZS3 305 aaKnown RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 SRD5A3Q9H8P0 318 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 CDH20Q9HBT6 801 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 DLL3Q9NYJ7 618 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 LRFN1Q9P244 771 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
COL17A1-203ENST00000393211 ERRFI1Q9UJM3 462 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-203ENST00000393211 RTTNQ86VV8 2226 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 TMEM250H0YL14 139 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 J3QW42 95 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 TNFSF12O43508 249 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 SYNGR1O43759 233 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 SYNGR4O95473 234 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 MBP02144 154 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 SOD3P08294 240 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 CCL4P13236 92 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 PLP2Q04941 152 aa8.5□□□□□ -1.05
COL17A1-203ENST00000393211 TMEM267Q0VDI3 215 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-203ENST00000393211 SSPNQ14714 243 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms