RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PRR27Q6MZM9 219 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 LYPD8Q6UX82 237 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 TUBG2Q9NRH3 451 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 PIPOXQ9P0Z9 390 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 EWSR1Q01844 656 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCN3B-202ENST00000392770 BSCL2Q96G97 398 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-202ENST00000392770 PTPRDP23468 1912 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 PPP1R2P9O14990 202 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 CLN5O75503 358 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 OR2T6Q8NHC8 308 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 FAM131CQ96AQ9 280 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 A0A1B0GU03 582 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 TSTD3H0UI37 97 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-202ENST00000392770 ZNF737O75373 536 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 ZNF708P17019 499 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 TMEM255AQ5JRV8 349 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 SFXN3Q9BWM7 321 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 PKIBQ9C010 78 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 SHISA3A0PJX4 238 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 CEACAM1P13688 526 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 DCAF12L2Q5VW00 463 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 VSTM2AQ8TAG5 236 aa14.3□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A10PA6NDY2 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A18PA6NE21 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A16PA6NEW6 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A20PA6NIJ5 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A8PA6NJQ4 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A7PA6NKC0 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A22PA8MWA6 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A12PA8MX19 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A5PA8MXJ8 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A23PA8MXZ1 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CLDN14O95500 239 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 HBZP02008 142 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 MBPP02686 304 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A15PP0C7V4 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A13PP0C7W8 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A14PP0C7W9 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 FAM90A24PP0C7X0 464 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 F2RP25116 425 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CDC34P49427 236 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CLEC12BQ2HXU8 276 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CABLES2Q9BTV7 478 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 LPAR3Q9UBY5 353 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 NAT2P11245 290 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 NDFIP1Q9BT67 221 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 RGP1Q92546 391 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-202ENST00000392770 SEBOXQ9HB31 216 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CCDC88CQ9P219 2028 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CTRB1P17538 263 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CTRB2Q6GPI1 263 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 C17orf82Q86X59 251 aaPredicted RBP14.29□□□□□ -0.12
SCN3B-202ENST00000392770 SHISA5Q8N114 240 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 DOK5Q9P104 306 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 OR1A1Q9P1Q5 309 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 KCNAB3O43448 404 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 CDS2O95674 445 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 Q96M66 194 aa14.29□□□□□ -0.12
SCN3B-202ENST00000392770 SYNGR3O43761 229 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 TGIF2LYQ8IUE0 185 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 TGIF2LXQ8IUE1 241 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 OR5B3Q8NH48 314 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 GHITMQ9H3K2 345 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 FAM157AC9JC47 383 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 SCGB2A2Q13296 93 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 BARX1Q9HBU1 254 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-202ENST00000392770 ZNF785A8K8V0 405 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 RPL31P62899 125 aaKnown RBP14.28□□□□□ -0.12
SCN3B-202ENST00000392770 PDZD11Q5EBL8 140 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 PHYHD1Q5SRE7 291 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 TXN2Q99757 166 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 LOC390937A0A1W2PQ73 354 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 MGST3O14880 152 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 CD200P41217 278 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 FLYWCH2Q96CP2 140 aaKnown RBP14.28□□□□□ -0.12
SCN3B-202ENST00000392770 ABHD14AQ9BUJ0 271 aa14.28□□□□□ -0.12
SCN3B-202ENST00000392770 AARDQ4LEZ3 155 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 ZDHHC8Q9ULC8 765 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 SLC45A2Q9UMX9 530 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 MYLKQ15746 1914 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 RHOBP62745 196 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 TNFSF18Q9UNG2 199 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 WSB1Q9Y6I7 421 aa14.27□□□□□ -0.12
SCN3B-202ENST00000392770 DUXBA0A1W2PPF3 345 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 CHEK1O14757 476 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 TOX4O94842 621 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 CD59P13987 128 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 VWA1Q6PCB0 445 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 Q6ZT83 130 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 SH2D2AQ9NP31 389 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 CLN8Q9UBY8 286 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 GPR132Q9UNW8 380 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 SERTM2A0A1B0GWG4 89 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 CYB5R3P00387 301 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-202ENST00000392770 NQO2P16083 231 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 KLK2P20151 261 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 NPBWR2P48146 333 aa14.27□□□□□ -0.13
SCN3B-202ENST00000392770 SULT1A1P50225 295 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms