RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 DUX4L2P0CJ85 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4L3P0CJ86 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4L4P0CJ87 422 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4L5P0CJ88 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4L6P0CJ89 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4L7P0CJ90 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 TPT1P13693 172 aaKnown RBP16.88■□□□□ 0.29
PTPN11-202ENST00000392597 CCKARP32238 428 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 PAX5Q02548 391 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 RBPJQ06330 500 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 TMEM268Q5VZI3 342 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 SLC35G3Q8N808 338 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 OR10V1Q8NGI7 309 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 IL1F10Q8WWZ1 152 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 TAF9BQ9HBM6 251 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 KCNIP1Q9NZI2 227 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 DUX4Q9UBX2 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 ERRFI1Q9UJM3 462 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-202ENST00000392597 ZSCAN5BA6NJL1 495 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 TAAR5O14804 337 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 PGLYRP1O75594 196 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-202ENST00000392597 CD40P25942 277 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 CEBPDP49716 269 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-202ENST00000392597 LRRC29Q8WV35 223 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 PLEKHA2Q9HB19 425 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 OR1A1Q9P1Q5 309 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 SRRM5B3KS81 715 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 ATP6V1G2-DDX39BF2Z307 99 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 MBPP02686 304 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-202ENST00000392597 HEXAP06865 529 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 SELENOVP59797 346 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 TESK1Q15569 626 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 MEX3BQ6ZN04 569 aaKnown RBP16.87■□□□□ 0.29
PTPN11-202ENST00000392597 ZNF695Q8IW36 515 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 NUP37Q8NFH4 326 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 OR5D13Q8NGL4 314 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 AKR1E2Q96JD6 320 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 SPIN2AQ99865 258 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 SPIN2BQ9BPZ2 258 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 CYTL1Q9NRR1 136 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 ASF1BQ9NVP2 202 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 ARID1AO14497 2285 aa16.87■□□□□ 0.29
PTPN11-202ENST00000392597 E5RGE8 158 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 HKR1P10072 659 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 F2RP25116 425 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 OR3A1P47881 315 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 SNTB1Q13884 538 aaKnown RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 SELENOHQ8IZQ5 122 aaKnown RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 NSG2Q9Y328 171 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 IGSF10Q6WRI0 2623 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 OOEPA6NGQ2 149 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 K7EPK0 472 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 ATXN7O15265 892 aaPredicted RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 HSPA12AO43301 675 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 TMEM108Q6UXF1 575 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 FOXRED2Q8IWF2 684 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 BAP18Q8IXM2 172 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 FAM71E2Q8N5Q1 922 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 RELL2Q8NC24 303 aaPredicted RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 OR4D5Q8NGN0 318 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 RBPMSQ93062 196 aaKnown RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 MEGF10Q96KG7 1140 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 PFDN2Q9UHV9 154 aa16.86■□□□□ 0.29
PTPN11-202ENST00000392597 LSM5Q9Y4Y9 91 aaKnown RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 CHD3Q12873 2000 aaKnown RBP16.86■□□□□ 0.29
PTPN11-202ENST00000392597 TRAV39A0A0B4J263 110 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 PTAFRP25105 342 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 RPL12P30050 165 aaKnown RBP16.85■□□□□ 0.29
PTPN11-202ENST00000392597 GATA4P43694 442 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 EIF5AP63241 154 aaKnown RBP16.85■□□□□ 0.29
PTPN11-202ENST00000392597 AANATQ16613 207 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 C22orf34Q6ZV56 151 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 ABHD14BQ96IU4 210 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 OR2V2Q96R30 315 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 ZFYVE26Q68DK2 2539 aa16.85■□□□□ 0.29
PTPN11-202ENST00000392597 KMT2BQ9UMN6 2715 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-202ENST00000392597 CLEC18AA5D8T8 446 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 ST8SIA3O43173 380 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 SCGB1D2O95969 90 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 COL10A1Q03692 680 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 FAM219AQ8IW50 185 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 PRR18Q8N4B5 295 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 CLEC18CQ8NCF0 446 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 GALMQ96C23 342 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 COQ2Q96H96 371 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 CXorf58Q96LI9 332 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 TOLLIPQ9H0E2 274 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 COL6A6A6NMZ7 2263 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 MFSD2BA6NFX1 497 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 VDAC1P21796 283 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 PRDX2P32119 198 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 PRR30Q53SZ7 412 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-202ENST00000392597 VHLLQ6RSH7 139 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 OR52M1Q8NGK5 317 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 LRRC20Q8TCA0 184 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 REG4Q9BYZ8 158 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 MRPL37Q9BZE1 423 aaKnown RBP16.84■□□□□ 0.29
PTPN11-202ENST00000392597 DNTTIP1Q9H147 329 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 SDHAF2Q9NX18 166 aa16.84■□□□□ 0.29
PTPN11-202ENST00000392597 POMT1Q9Y6A1 747 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms