RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ZNF665Q9H7R5 613 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 IGLV3-16A0A075B6K0 115 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 MOSPD3O75425 235 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 KIR3DL2P43630 455 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 RND3P61587 244 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 FXYD3Q14802 87 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 DEFB109BQ30KR1 87 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 FAM157AC9JC47 383 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 CDS2O95674 445 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 MTURNQ8N3F0 131 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 TRIP11Q15643 1979 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 IBA57Q5T440 356 aaKnown RBP14.15□□□□□ -0.14
SHANK1-204ENST00000391814 OR4S2Q8NH73 311 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 FGF14Q92915 247 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 GAPDHP04406 335 aaKnown RBP14.15□□□□□ -0.14
SHANK1-204ENST00000391814 PPP1CCP36873 323 aaKnown RBP14.15□□□□□ -0.14
SHANK1-204ENST00000391814 FOXC1Q12948 553 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 ALKBH7Q9BT30 221 aaPredicted RBP14.15□□□□□ -0.14
SHANK1-204ENST00000391814 ASCL3Q9NQ33 180 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF502Q8TBZ5 544 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 FBLIM1Q8WUP2 373 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 GNRHR2Q96P88 292 aa14.15□□□□□ -0.14
SHANK1-204ENST00000391814 CTSVO60911 334 aa14.15□□□□□ -0.15
SHANK1-204ENST00000391814 KLF13Q9Y2Y9 288 aaPredicted RBP14.15□□□□□ -0.15
SHANK1-204ENST00000391814 APELAP0DMC3 54 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 DPH3Q96FX2 82 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 SLC25A17O43808 307 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 TEPPQ6URK8 271 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 OR52M1Q8NGK5 317 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 PGLYRP4Q96LB8 373 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 KCNK7Q9Y2U2 307 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 ATRAIDQ6UW56 229 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 ZNF519Q8TB69 540 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 FAM216AQ8WUB2 273 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 SAP30LQ9HAJ7 183 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 COX7A1P24310 79 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 C1QL3Q5VWW1 255 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 C16orf47Q6ZP98 133 aaPredicted RBP14.14□□□□□ -0.15
SHANK1-204ENST00000391814 PERPQ96FX8 193 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 hADV38S2A0JD32 116 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 SRIP30626 198 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 GGTLC2Q14390 218 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 CST9Q5W186 159 aa14.14□□□□□ -0.15
SHANK1-204ENST00000391814 TRAV39A0A0B4J263 110 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 TMEM238LA0A1B0GVL6 79 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 A6NJY4 79 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 RPL36A-HNRNPH2H7BZ11 118 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 KBTBD11O94819 623 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 ARF6P62330 175 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 SNRPCP09234 159 aaKnown RBP14.13□□□□□ -0.15
SHANK1-204ENST00000391814 FOLR2P14207 255 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 PNLIPP16233 465 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 ZNF766Q5HY98 468 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 MVB12AQ96EY5 273 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 ATG4DQ86TL0 474 aaPredicted RBP14.13□□□□□ -0.15
SHANK1-204ENST00000391814 CADM4Q8NFZ8 388 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 ARAP2Q8WZ64 1704 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 LEPROTL1O95214 131 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 FHITP49789 147 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 PRRX1P54821 245 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 KIAA1644Q3SXP7 199 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 FAM131CQ96AQ9 280 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 WNT10AQ9GZT5 417 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 GALNSP34059 522 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 AQP10Q96PS8 301 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 DNAJC4Q9NNZ3 241 aa14.13□□□□□ -0.15
SHANK1-204ENST00000391814 SAMD13Q5VXD3 122 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 WIPI2Q9Y4P8 454 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 TRAV38-1A0A0B4J264 116 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 TSPAN13O95857 204 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 HBZP02008 142 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 NPBWR2P48146 333 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 ZP1P60852 638 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 KISS1RQ969F8 398 aaPredicted RBP14.12□□□□□ -0.15
SHANK1-204ENST00000391814 AGAP20933 346 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 ZIC1Q15915 447 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 TMEM211Q6ICI0 200 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 ANKRD37Q7Z713 158 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 OR2V2Q96R30 315 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 PXMP4Q9Y6I8 212 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 ALS2Q96Q42 1657 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 IGHV3-21A0A0B4J1V1 117 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 RIPPLY3P57055 190 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 AUP1Q9Y679 476 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 C3orf80F5H4A9 247 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 SMIM13P0DJ93 91 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 DEFB123Q8N688 67 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 PAXXQ9BUH6 204 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 KCNE5Q9UJ90 142 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 CDC42EP3Q9UKI2 254 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 NUP205Q92621 2012 aa14.12□□□□□ -0.15
SHANK1-204ENST00000391814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 RPEQ96AT9 228 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 CXXC4Q9H2H0 198 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 FCGR3AP08637 254 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms