RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KIF5BP33176 963 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CA5AP35218 305 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GGT2P36268 569 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RFC3P40938 356 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 P2RY1P47900 373 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMB2P49721 201 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SSR4P51571 173 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PLA2G16P53816 162 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TSPEAR-AS2P59090 65 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DEFB1P60022 68 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TPI1P60174 286 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 EIF3EP60228 445 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 YWHAGP61981 247 aaKnown RBP eCLIP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RPL10AP62906 217 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RBP5P82980 135 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RHOGP84095 191 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM3AP98173 230 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 STK4Q13043 487 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CAMK2DQ13557 499 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SNX1Q13596 522 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DDX39BQ13838 428 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SSX1Q16384 188 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CARTPTQ16568 116 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 HFEQ30201 348 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 BSXQ3C1V8 233 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ANKDD1AQ495B1 522 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPL51Q4U2R6 128 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 IFI44LQ53G44 452 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 HSP90AB4PQ58FF6 505 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM41BQ5BJD5 291 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TNFAIP8L3Q5GJ75 292 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 KRBOX4Q5JUW0 171 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 UBE2NLQ5JXB2 153 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM31Q5JXX7 168 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TTC23LQ6PF05 361 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM159AQ6UWV7 190 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DRAM2Q6UX65 266 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 NPSR1Q6W5P4 371 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DPY19L4Q7Z388 723 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC186Q7Z3E2 898 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SPATA19Q7Z5L4 167 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MTERF4Q7Z6M4 381 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PRNTQ86SH4 94 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ACOT1Q86TX2 421 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LINC00596Q86U02 117 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PHF13Q86YI8 300 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC83Q8IWF9 413 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 C10orf67Q8IYJ2 551 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RPP25LQ8N5L8 163 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TBC1D19Q8N5T2 526 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TMCO5AQ8N6Q1 288 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC89Q8N998 374 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CNEP1R1Q8N9A8 125 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 OR4P4Q8NGL7 312 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SVIPQ8NHG7 77 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PFN4Q8NHR9 129 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDND2Q8NHS1 167 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMA8Q8TAA3 256 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 UBA3Q8TBC4 463 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 FNDC9Q8TBE3 224 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 OR51E1Q8TCB6 317 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SCGB1C1Q8TD33 95 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SFT2D1Q8WV19 159 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM239Q8WW34 195 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 OPTNQ96CV9 577 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 NRBF2Q96F24 287 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PKNOX2Q96KN3 472 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 C7orf34Q96L11 122 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LYSMD1Q96S90 227 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 INTS14Q96SY0 518 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 IMMP2LQ96T52 175 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CHP1Q99653 195 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC25A21Q9BQT8 299 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CHCHD6Q9BRQ6 235 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPL13Q9BYD1 178 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ILKAPQ9H0C8 392 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 STMN4Q9H169 189 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 WFDC10AQ9H1F0 79 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ARV1Q9H2C2 271 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MIXL1Q9H2W2 232 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GHITMQ9H3K2 345 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RHOJQ9H4E5 214 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RIBC2Q9H4K1 309 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 C11orf1Q9H5F2 150 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 THAP9Q9H5L6 903 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 NIPAL2Q9H841 368 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PSTPIP2Q9H939 334 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ANKRA2Q9H9E1 313 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LIN28AQ9H9Z2 209 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM9BQ9NQ34 198 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PRMT8Q9NR22 394 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 AGPAT5Q9NUQ2 364 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TAAR3PQ9P1P4 343 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GNG12Q9UBI6 72 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CD300AQ9UGN4 299 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MAD2L2Q9UI95 211 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PITPNC1Q9UKF7 332 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 BAIAP2Q9UQB8 552 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 C14orf166Q9Y224 244 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 POLR1DQ9Y2S0 133 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms