RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FAM206AQ9NX38 181 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RASL12Q9NYN1 266 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 KCNIP1Q9NZI2 227 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 XCL2Q9UBD3 114 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PRO0628Q9UI54 55 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 JPT1Q9UK76 154 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 COPS3Q9UNS2 423 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 C14orf166Q9Y224 244 aaKnown RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ANGPT4Q9Y264 503 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR51B2Q9Y5P1 312 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 MYH10P35580 1976 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CLUHO75153 1309 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PALLDQ8WX93 1383 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 NUP153P49790 1475 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 BAZ1BQ9UIG0 1483 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 DYSFO75923 2080 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 KIF1BO60333 1816 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 IGLV3-22A0A075B6J6 115 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ISPDA4D126 451 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR4C46A6NHA9 309 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PCNX2A6NKB5 2137 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 FAM159BA6NKW6 160 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 F5H5K5 113 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SMKR1H3BMG3 65 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 MANBAO00462 879 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GABRPO00591 440 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 NME4O00746 187 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PHYHO14832 338 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SLC22A1O15245 554 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RAD51CO43502 376 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF207O43670 478 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PDE6DO43924 150 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 POP7O75817 140 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR7C1O76099 320 aaPredicted RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 CDRT1O95170 752 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PDYNP01213 254 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 IFNA10P01566 189 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 C1QCP02747 245 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 IFNA4P05014 189 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SERPINA7P05543 415 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 CRYGDP07320 174 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 BPGMP07738 259 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR5AL1P0C617 328 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR56A5P0C7T3 313 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SMIM6P0DI80 62 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ESDP10768 282 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GPX2P18283 190 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RAB3AP20336 220 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RAB5AP20339 215 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 S100A7P31151 101 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PYCR1P32322 319 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RPA3P35244 121 aaPredicted RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 MAP2K4P45985 399 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GALR1P47211 349 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 LGALS7P47929 136 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PSMD8P48556 350 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 FABP6P51161 128 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TCTAP57738 103 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR12D2P58182 307 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RAP1AP62834 184 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SLC7A9P82251 487 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RPL18AQ02543 176 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TWF1Q12792 350 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PPP1R1AQ13522 171 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TFDP2Q14188 446 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF235Q14590 738 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RSU1Q15404 277 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SURF2Q15527 256 aaPredicted RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GRK1Q15835 563 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 LIN52Q52LA3 116 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TRMT12Q53H54 448 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM128Q5BJH2 165 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 COA6Q5JTJ3 125 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 C9orf64Q5T6V5 341 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 C1orf195Q5TG92 126 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 UBE2UQ5VVX9 321 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM215Q68D42 235 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RWDD4Q6NW29 188 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SFXN4Q6P4A7 337 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TRIM40Q6P9F5 258 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SPNS3Q6ZMD2 512 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 LINC00173Q6ZV60 143 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 FAM231DQ6ZW35 169 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PEX26Q7Z412 305 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 COMMD7Q86VX2 200 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 LRRC28Q86X40 367 aaPredicted RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RAB43Q86YS6 212 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PIANPQ8IYJ0 282 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 DAW1Q8N136 415 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GAPTQ8N292 157 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM86BQ8N661 226 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ST6GALNAC3Q8NDV1 305 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR8G5Q8NG78 346 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR52E4Q8NGH9 312 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR6N1Q8NGY5 312 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR13G1Q8NGZ3 307 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR4S2Q8NH73 311 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SPPL2BQ8TCT7 592 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PYROXD1Q8WU10 500 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 C1orf54Q8WWF1 131 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms