RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GCH1P30793 250 aa12.62□□□□□ -0.39
VPS9D1-201ENST00000389386 Q6ZWC4 215 aa12.62□□□□□ -0.39
VPS9D1-201ENST00000389386 GPR27Q9NS67 375 aa12.62□□□□□ -0.39
VPS9D1-201ENST00000389386 K7EP13 123 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 IGLV3-19P01714 112 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CAPZBP47756 277 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 UBE2NP61088 152 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ACSF3Q4G176 576 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 H1FNTQ75WM6 255 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ANAPC16Q96DE5 110 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 KLHL13Q9P2N7 655 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 PTRH2Q9Y3E5 179 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 TECTAO75443 2155 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ADAMTS9Q9P2N4 1935 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 TRBV11-1A0A0K0K1C0 115 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 NPIPB13A6NJU9 1138 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ALG1L2C9J202 215 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 NPIPB4C9JG80 1138 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 IFNA1P01562 189 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 BLACEA4D250 179 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ZNF737O75373 536 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CNOT4O95628 575 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 AADACP22760 399 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 KLF3P57682 345 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 RIPPLY2Q5TAB7 128 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 DYRK2Q92630 601 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 ADIPOR1Q96A54 375 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 LYZL4Q96KX0 146 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 PNO1Q9NRX1 252 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 UBE2J1Q9Y385 318 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 RNF115Q9Y4L5 304 aa12.61□□□□□ -0.39
VPS9D1-201ENST00000389386 CNTRLQ7Z7A1 2325 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 RER1O15258 196 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 TNFSF12O43508 249 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 BIDP55957 195 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 LCN2P80188 198 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 MEF2BQ02080 365 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 UEVLDQ8IX04 471 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 CCDC74BQ96LY2 380 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 PNRC2Q9NPJ4 139 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 PPIAL4AQ9Y536 164 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 RTTNQ86VV8 2226 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 A0A1W2PQD3 144 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 NXPH3O95157 252 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 IL3RAP26951 378 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 CXCL12P48061 93 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 HERV-K104P61576 105 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 ORAOV1Q8WV07 137 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 PIGTQ969N2 578 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 ZNF286AQ9HBT8 521 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 PXMP4Q9Y6I8 212 aa12.6□□□□□ -0.39
VPS9D1-201ENST00000389386 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 IL12BP29460 328 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 CDAP32320 146 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 PI4KAP42356 2102 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 OR1D5P58170 312 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 MMDQ15546 238 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 STPG4Q8N801 248 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 ADPRHL1Q8NDY3 354 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 A0A1W2PR77 199 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 FAHP16930 419 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 HOXC12P31275 282 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 TLE3Q04726 772 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 MFAP5Q13361 173 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 VHLLQ6RSH7 139 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 DTX1Q86Y01 620 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 MRPL13Q9BYD1 178 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 PARLQ9H300 379 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
VPS9D1-201ENST00000389386 CEP192Q8TEP8 1941 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 HSBP1L1C9JCN9 74 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM250H0YL14 139 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 CD27P26842 260 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 KCNIP4Q6PIL6 250 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 BRICD5Q6PL45 260 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms