RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 OR52E5Q8NH55 327 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 NT5CQ8TCD5 201 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 CASTOR1Q8WTX7 329 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 PIH1D2Q8WWB5 315 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 NT5C3BQ969T7 300 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 TAMM41Q96BW9 452 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 ZNF707Q96C28 371 aaPredicted RBP-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 LINC00526Q96FQ7 95 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 ZBTB18Q99592 522 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 TBX5Q99593 518 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 ACBD6Q9BR61 282 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 FAAP24Q9BTP7 215 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 TMEM70Q9BUB7 260 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 SHCBP1LQ9BZQ2 653 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 SLC25A31Q9H0C2 315 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 SLC38A1Q9H2H9 487 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 VCX3BQ9H321 246 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 TRABDQ9H4I3 376 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 ANKHQ9HCJ1 492 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 CD209Q9NNX6 404 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 MRPS30Q9NP92 439 aaKnown RBP-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 CCNB1IP1Q9NPC3 277 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 LYARQ9NX58 379 aaKnown RBP-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 SNX12Q9UMY4 172 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 TFR2Q9UP52 801 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 POMPQ9Y244 141 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 KLF12Q9Y4X4 402 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 CPAMD8Q8IZJ3 1885 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 SETD5Q9C0A6 1442 aa-0.31□□□□□ -2.46
SNORD28-201ENST00000384706 DENND4CQ5VZ89 1909 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 E9PCH4 1651 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ADAMTSL3P82987 1691 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 KCNE1BA0A087WTH5 132 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 RBFOX3A6NFN3 312 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 B4DEV8 164 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 H3BN98 237 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TEX46H3BTG2 121 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 BHLHE40O14503 412 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 PHYHO14832 338 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 NCR3O14931 201 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TCF21O43680 179 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 MT-CO2P00403 227 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 GCGP01275 180 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 LTAP01374 205 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CD8AP01732 235 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SERPINA7P05543 415 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 IGHV3-30-3P0DP02 117 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 RNASE3P12724 160 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 KDELR1P24390 212 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 PSMA1P25786 263 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 STOMP27105 288 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 PPP1CCP36873 323 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CBX5P45973 191 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 XCL1P47992 114 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 GBX2P52951 348 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 RGS8P57771 180 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TAS2R20P59543 309 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TOMM34Q15785 309 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TMEM249Q2WGJ8 235 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ALKBH6Q3KRA9 238 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ANKDD1AQ495B1 522 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SPINK9Q5DT21 86 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SYT6Q5T7P8 510 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 PRAMEF20Q5VT98 475 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 TWF2Q6IBS0 349 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 DGAT2L6Q6ZPD8 337 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 FAM43BQ6ZT52 329 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 DCXRQ7Z4W1 244 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SETD3Q86TU7 594 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 NELFCDQ8IXH7 590 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 GABRG1Q8N1C3 465 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 C12orf29Q8N999 325 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 OR51T1Q8NGJ9 327 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 OR4C6Q8NH72 309 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SUN5Q8TC36 379 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CA5BP1Q8WTZ4 195 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CCL17Q92583 94 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 FBXO32Q969P5 355 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 SERPINI1Q99574 410 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 EBNA1BP2Q99848 306 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 FAM103A1Q9BTL3 118 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ANP32EQ9BTT0 268 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CDCA4Q9BXL8 241 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 COA1Q9GZY4 146 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 RSPH9Q9H1X1 276 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 GOLPH3Q9H4A6 298 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 C11orf1Q9H5F2 150 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CRLF2Q9HC73 371 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 RPRD1BQ9NQG5 326 aaKnown RBP-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ZC4H2Q9NQZ6 224 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 DDIT4Q9NX09 232 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ANXA10Q9UJ72 324 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 CFL2Q9Y281 166 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 FAM215AQ9Y5M1 114 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 ABCA2Q9BZC7 2435 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 MYO5BQ9ULV0 1848 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
SNORD28-201ENST00000384706 DSCAMO60469 2012 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 LOC110117498A0A087WWA1 95 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 A0A1B0GXF2 115 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms