RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MLF2Q15773 248 aaPredicted RBP12.98□□□□□ -0.33
VLDLR-202ENST00000382099 EXT1Q16394 746 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 SLC38A9Q8NBW4 561 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 MSI2Q96DH6 328 aaKnown RBP12.98□□□□□ -0.33
VLDLR-202ENST00000382099 ANXA10Q9UJ72 324 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
VLDLR-202ENST00000382099 IGHV1-69-2A0A0G2JMI3 117 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 DPRXA6NFQ7 191 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 PGPEP1LA6NFU8 196 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 NKX2-2O95096 273 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 TMEM50AO95807 157 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 HNRNPA2B1P22626 353 aaKnown RBP12.98□□□□□ -0.33
VLDLR-202ENST00000382099 CTRLP40313 264 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 MDH2P40926 338 aaKnown RBP12.98□□□□□ -0.33
VLDLR-202ENST00000382099 PRICKLE4Q2TBC4 344 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 LCN12Q6JVE5 192 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 VN1R4Q7Z5H5 301 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 TCEAL8Q8IYN2 117 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
VLDLR-202ENST00000382099 TRAV1-1A0A0B4J248 108 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 ZNF816-ZNF321PA0A0X1KG74 233 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 IGLON5A6NGN9 336 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 C1QTNF9BB2RNN3 333 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 HRKO00198 91 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 FCN1O00602 326 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 GPR75O95800 540 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 ISG15P05161 165 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 TM4SF4P48230 202 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 PRRX1P54821 245 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 ZNF90Q03938 601 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 NAT6Q93015 286 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 SARAFQ96BY9 339 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 SPIN2AQ99865 258 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 SPIN2BQ9BPZ2 258 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 MRPL18Q9H0U6 180 aaKnown RBP12.97□□□□□ -0.33
VLDLR-202ENST00000382099 G3V3Y1 287 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 SPINK4O60575 86 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 ZNF253O75346 499 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 CTXN2P0C2S0 81 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 CTSSP25774 331 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 ZNF133P52736 654 aaPredicted RBP12.97□□□□□ -0.33
VLDLR-202ENST00000382099 RPL27P61353 136 aaKnown RBP12.97□□□□□ -0.33
VLDLR-202ENST00000382099 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 RLN3Q8WXF3 142 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 NUDT16L1Q9BRJ7 211 aaKnown RBP12.97□□□□□ -0.33
VLDLR-202ENST00000382099 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
VLDLR-202ENST00000382099 CYR61O00622 381 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 MPV17L2Q567V2 206 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 TP73-AS1Q9UF72 201 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 C1QTNF9P0C862 333 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 LINC00310P59036 64 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 RPS18P62269 152 aaKnown RBP12.96□□□□□ -0.33
VLDLR-202ENST00000382099 CD226Q15762 336 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 KIAA1644Q3SXP7 199 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 WDR73Q6P4I2 378 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 FAM19A2Q8N3H0 131 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 BORCS7Q96B45 105 aa12.96□□□□□ -0.33
VLDLR-202ENST00000382099 LRRK1Q38SD2 2015 aa12.96□□□□□ -0.34
VLDLR-202ENST00000382099 IGLV1-36A0A0B4J1U3 117 aa12.96□□□□□ -0.34
VLDLR-202ENST00000382099 CRYAAP02489 173 aa12.96□□□□□ -0.34
VLDLR-202ENST00000382099 ATG4DQ86TL0 474 aaPredicted RBP12.96□□□□□ -0.34
VLDLR-202ENST00000382099 GJE1A6NN92 205 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 SERPINE3A8MV23 424 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 THBS3P49746 956 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 PMP22Q01453 160 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 CCDC71LQ8N9Z2 235 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 LRRC3BQ96PB8 259 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 KLHDC3Q9BQ90 382 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 PAGE4O60829 102 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 KITLGP21583 273 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 IER3P46695 156 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 PLPPR5Q32ZL2 321 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 STUMQ69YW2 141 aa12.95□□□□□ -0.34
VLDLR-202ENST00000382099 SP5Q6BEB4 398 aaPredicted RBP12.95□□□□□ -0.34
VLDLR-202ENST00000382099 MRPS16Q9Y3D3 137 aaKnown RBP12.95□□□□□ -0.34
VLDLR-202ENST00000382099 MDFIC2A0A1B0GVS7 189 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 IGLC7A0M8Q6 106 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 NUDT3O95989 172 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 NRASP01111 189 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 KRASP01116 189 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 IAPPP10997 89 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 ARRDC3Q96B67 414 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 C1orf147Q96MC9 270 aaPredicted RBP12.94□□□□□ -0.34
VLDLR-202ENST00000382099 C3orf85A0A1B0GTC6 90 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 OTOL1A6NHN0 477 aaPredicted RBP12.94□□□□□ -0.34
VLDLR-202ENST00000382099 BAXQ07812 192 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 NSDHLQ15738 373 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 OR5AS1Q8N127 324 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 SLC39A11Q8N1S5 342 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 S1PR5Q9H228 398 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 SEC16AO15027 2179 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 OR6C6A6NF89 314 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 AHRRA9YTQ3 701 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 SPINT1O43278 529 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 GPX1P07203 203 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 SMAGPQ0VAQ4 97 aa12.94□□□□□ -0.34
VLDLR-202ENST00000382099 Q56UQ5 140 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms