RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
SNPH-201ENST00000381867 STPG1Q5TH74 334 aa12.25□□□□□ -0.45
SNPH-201ENST00000381867 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
SNPH-201ENST00000381867 GRAMD2BQ96HH9 432 aa12.25□□□□□ -0.45
SNPH-201ENST00000381867 VSTM2LQ96N03 204 aa12.25□□□□□ -0.45
SNPH-201ENST00000381867 CCL28Q9NRJ3 127 aa12.25□□□□□ -0.45
SNPH-201ENST00000381867 MAP1BP46821 2468 aaKnown RBP12.25□□□□□ -0.45
SNPH-201ENST00000381867 SLC22A18ASQ8N1D0 253 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 MS4A18H0YCH9 400 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 RHBDL1O75783 438 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 COL8A1P27658 744 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 MS4A18Q3C1V0 323 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 ASB5Q8WWX0 329 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 CHRNA10Q9GZZ6 450 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 OOEPA6NGQ2 149 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 K7ESF4 209 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 EML2O95834 649 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 GHITMQ9H3K2 345 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
SNPH-201ENST00000381867 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 WDFY1Q8IWB7 410 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
SNPH-201ENST00000381867 SSMEM1Q8WWF3 244 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 MEX3AA1L020 520 aaKnown RBP12.24□□□□□ -0.45
SNPH-201ENST00000381867 RCC1P18754 421 aaPredicted RBP12.24□□□□□ -0.45
SNPH-201ENST00000381867 PEBP1P30086 187 aaKnown RBP12.24□□□□□ -0.45
SNPH-201ENST00000381867 ZNF738Q8NE65 137 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 OR4A4PQ8NGN8 299 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 TM4SF19Q96DZ7 209 aa12.24□□□□□ -0.45
SNPH-201ENST00000381867 SPAARA0A1B0GVQ0 90 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 DNPH1O43598 174 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 TMIGD3P0DMS9 266 aaPredicted RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 VSIG8P0DPA2 414 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 SAP25Q8TEE9 199 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 CCL17Q92583 94 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 ABHD14AQ9BUJ0 271 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 CYB5R3P00387 301 aaPredicted RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 HIST1H1EP10412 219 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 BCL2P10415 239 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 FGF5P12034 268 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 BRS3P32247 399 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 RPL30P62888 115 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 MRPS11P82912 194 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 ZNF501Q96CX3 271 aaPredicted RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 SF3B5Q9BWJ5 86 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 CLEC5AQ9NY25 188 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 AMMECR1Q9Y4X0 333 aaPredicted RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 MFSD2BA6NFX1 497 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 PMELP40967 661 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 SOX8P57073 446 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 PUSL1Q8N0Z8 303 aaKnown RBP12.23□□□□□ -0.45
SNPH-201ENST00000381867 PTX4Q96A99 478 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 PERPQ96FX8 193 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 EFEMP2O95967 443 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 GCGP01275 180 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 PRRX1P54821 245 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 TMEM50BP56557 158 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 SRSF9Q13242 221 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNPH-201ENST00000381867 SSX8Q7RTT4 187 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 HOGA1Q86XE5 327 aa12.23□□□□□ -0.45
SNPH-201ENST00000381867 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 VSIG10L2P0DP72 767 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 OR2D3Q8NGH3 330 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 NTN1O95631 604 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 GAPDHP04406 335 aaKnown RBP12.22□□□□□ -0.45
SNPH-201ENST00000381867 ACP1P24666 158 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 EFNB2P52799 333 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 MBD1Q9UIS9 605 aaPredicted RBP12.22□□□□□ -0.45
SNPH-201ENST00000381867 KLK13Q9UKR3 277 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 PATE3B3GLJ2 98 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 LYZL6O75951 148 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 PATE4P0C8F1 98 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 CCL4P13236 92 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 CCL2P13500 99 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 LTBRP36941 435 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 ZNF385CQ66K41 422 aaPredicted RBP12.22□□□□□ -0.45
SNPH-201ENST00000381867 OR4A47Q6IF82 309 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 RASL10BQ96S79 203 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 OR51M1Q9H341 326 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 A0A1W2PR77 199 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 CD1AP06126 327 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 NGFRP08138 427 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 CYB561D1Q8N8Q1 229 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 LRRC75AQ8NAA5 344 aa12.22□□□□□ -0.45
SNPH-201ENST00000381867 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.45
SNPH-201ENST00000381867 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.45
SNPH-201ENST00000381867 OR2W1Q9Y3N9 320 aa12.21□□□□□ -0.45
SNPH-201ENST00000381867 KNL1Q8NG31 2342 aa12.21□□□□□ -0.45
SNPH-201ENST00000381867 LIPT2A6NK58 231 aa12.21□□□□□ -0.45
SNPH-201ENST00000381867 GZMMP51124 257 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms