RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 LINC00574Q9H8X3 128 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
SNRPB-201ENST00000381342 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 MFNGO00587 321 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 ORC5O43913 435 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 IGHV3-7P01780 117 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 HIST1H1DP16402 221 aaKnown RBP13.13□□□□□ -0.31
SNRPB-201ENST00000381342 GZMHP20718 246 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 PAX6P26367 422 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 FOXL1Q12952 345 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 SPCS2Q15005 226 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 ABHD12Q8N2K0 398 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 OR1L1Q8NH94 360 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 RAB2BQ8WUD1 216 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 BCL7BQ9BQE9 202 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 ABRACLQ9P1F3 81 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 ZNRD1Q9P1U0 126 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 SPATA2Q9UM82 520 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 KCNK7Q9Y2U2 307 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
SNRPB-201ENST00000381342 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-201ENST00000381342 SPINT2O43291 252 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 TMEM127O75204 238 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 HBZP02008 142 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 FBP1P09467 338 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 CD34P28906 385 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 COMPP49747 757 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-201ENST00000381342 GNG10P50151 68 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 TMBIM6P55061 237 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 LGALS4P56470 323 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-201ENST00000381342 TRAT1Q6PIZ9 186 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
SNRPB-201ENST00000381342 TAF9BQ9HBM6 251 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 ELF5Q9UKW6 265 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-201ENST00000381342 CEPT1Q9Y6K0 416 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 DNHD1Q96M86 4753 aa13.12□□□□□ -0.31
SNRPB-201ENST00000381342 A0A087X0M5 115 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 A0A1B0GX30 115 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
SNRPB-201ENST00000381342 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
SNRPB-201ENST00000381342 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
SNRPB-201ENST00000381342 CRYBA1P05813 215 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 MELTFP08582 738 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 HKR1P10072 659 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 HMGN3Q15651 99 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 MOB1BQ7L9L4 216 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 SAMD12Q8N8I0 201 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 OR10A7Q8NGE5 316 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 KCNIP1Q9NZI2 227 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 STAB1Q9NY15 2570 aa13.11□□□□□ -0.31
SNRPB-201ENST00000381342 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 H3BMQ9 156 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 CLDN34H7C241 214 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 F2RL2O00254 374 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 SCGNO76038 276 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 IGLV1-47P01700 117 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 CD3GP09693 182 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 RORCP51449 518 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 GNMTQ14749 295 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 SLC9A3R2Q15599 337 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 Q6YL49 198 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 LDLRAD3Q86YD5 345 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 RIMS4Q9H426 269 aaPredicted RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 TNFRSF19Q9NS68 423 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 GFOD1Q9NXC2 390 aa13.1□□□□□ -0.31
SNRPB-201ENST00000381342 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
SNRPB-201ENST00000381342 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 SERPINE3A8MV23 424 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 TOR1AO14656 332 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 IGHV4-59P01825 116 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 FCGR3AP08637 254 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 LOXL3P58215 753 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 HLA-DRB5Q30154 266 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 C16orf87Q6PH81 154 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms