RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 OR4C45A6NMZ5 311 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 MOSP00540 346 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 DCKP27707 260 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 CD1BP29016 333 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 ETV1P50549 477 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 Q8N9W7 124 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 TNFAIP8L1Q8WVP5 186 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 CLEC2DQ9UHP7 191 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 TXNL1O43396 289 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 IGHG4P01861 327 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 OR8U8P0C7N1 319 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 LIMS3P0CW19 117 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 LIMS4P0CW20 117 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 RAB3AP20336 220 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 CRHBPP24387 322 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 SOX6P35712 828 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 GALEQ14376 348 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 RBM48Q5RL73 367 aaKnown RBP12.52□□□□□ -0.41
VCX3A-201ENST00000381089 CASC10Q5T4H9 136 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 SATL1Q86VE3 508 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 PARP16Q8N5Y8 322 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 LINC00311Q8N616 119 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 Q8N6K4 173 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 OR11H1Q8NG94 326 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 PLPPR1Q8TBJ4 325 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
VCX3A-201ENST00000381089 PELI1Q96FA3 418 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 S1PR3Q99500 378 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 DPCDQ9BVM2 203 aaPredicted RBP12.52□□□□□ -0.41
VCX3A-201ENST00000381089 CCDC90BQ9GZT6 254 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 ISG20L2Q9H9L3 353 aaKnown RBP12.52□□□□□ -0.41
VCX3A-201ENST00000381089 FKBP14Q9NWM8 211 aa12.52□□□□□ -0.41
VCX3A-201ENST00000381089 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
VCX3A-201ENST00000381089 TMEM30CPA0ZSE6 113 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 TMEM212A6NML5 194 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
VCX3A-201ENST00000381089 CDK1P06493 297 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 MRPL28Q13084 256 aaKnown RBP12.51□□□□□ -0.41
VCX3A-201ENST00000381089 FHL3Q13643 280 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
VCX3A-201ENST00000381089 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 RAB9BQ9NP90 201 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 BLOC1S6Q9UL45 172 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 LRRC42Q9Y546 428 aa12.51□□□□□ -0.41
VCX3A-201ENST00000381089 MYL12BO14950 172 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 RGS10O43665 173 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
VCX3A-201ENST00000381089 HTR3BO95264 441 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 DOC2BQ14184 412 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 Q3ZCU0 254 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 OR5AK2Q8NH90 309 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 ARL11Q969Q4 196 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 RCHY1Q96PM5 261 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 S100A13Q99584 98 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 DUSP21Q9H596 190 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 ST3GAL6Q9Y274 331 aa12.5□□□□□ -0.41
VCX3A-201ENST00000381089 HUWE1Q7Z6Z7 4374 aaKnown RBP12.49□□□□□ -0.41
VCX3A-201ENST00000381089 DYNC2H1Q8NCM8 4307 aaKnown RBP12.49□□□□□ -0.41
VCX3A-201ENST00000381089 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 GABRPO00591 440 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 CSTBP04080 98 aaKnown RBP12.49□□□□□ -0.41
VCX3A-201ENST00000381089 IGF1P05019 195 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 LYL1P12980 280 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 PSMB8P28062 276 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 CFHR3Q02985 330 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 TMPRSS11AQ6ZMR5 421 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 LINC00596Q86U02 117 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 ZNF429Q86V71 674 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 SYS1Q8N2H4 156 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 OR10K1Q8NGX5 313 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 UBE2E2Q96LR5 201 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 KCTD7Q96MP8 289 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 PLSCR3Q9NRY6 295 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 ZNF107Q9UII5 783 aaPredicted RBP12.49□□□□□ -0.41
VCX3A-201ENST00000381089 SORL1Q92673 2214 aa12.49□□□□□ -0.41
VCX3A-201ENST00000381089 E9PI62 339 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 ORC5O43913 435 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 CD2P06729 351 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 MAP2K4P45985 399 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 GBX2P52951 348 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms