RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 GFRA3O60609 400 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 LAMTOR1Q6IAA8 161 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 TMEM38BQ9NVV0 291 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 CCL3P10147 92 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 MBNL2Q5VZF2 373 aaKnown RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 FAHD1Q6P587 224 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 ZNF418Q8TF45 676 aaPredicted RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 TRDCB7Z8K6 153 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 CTSVO60911 334 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 DNAL4O96015 105 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 HINT1P49773 126 aaPredicted RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 CX3CL1P78423 397 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 MRM1Q6IN84 353 aaKnown RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 VSTM2AQ8TAG5 236 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 TMEM167BQ9NRX6 74 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 COX6CP09669 75 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 TDGF1P13385 188 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 EVX1P49640 407 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 EIF3IQ13347 325 aaKnown RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 CBLN3Q6UW01 205 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 TNFRSF12AQ9NP84 129 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 LYRM2Q9NU23 88 aaPredicted RBP10.9□□□□□ -0.66
CHD3-203ENST00000380358 FRRS1LQ9P0K9 344 aa10.9□□□□□ -0.66
CHD3-203ENST00000380358 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.67
CHD3-203ENST00000380358 TLNRD1Q9H1K6 362 aa10.9□□□□□ -0.67
CHD3-203ENST00000380358 A6NDN8 102 aa10.9□□□□□ -0.67
CHD3-203ENST00000380358 RPS4Y2Q8TD47 263 aa10.9□□□□□ -0.67
CHD3-203ENST00000380358 A0A0A6YYD5 115 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 OR2A4O95047 310 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 KHDC3LQ587J8 217 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PEAR1Q5VY43 1037 aaPredicted RBP10.89□□□□□ -0.67
CHD3-203ENST00000380358 LHFPL5Q8TAF8 219 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 LINC01560Q8TB33 94 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 OR2A7Q96R45 310 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 SCN1AP35498 2009 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PLPP3O14495 311 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 NKX2-8O15522 239 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PDCD6O75340 191 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 CT62P0C5K7 136 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 CDKN2AP42771 156 aaKnown RBP10.89□□□□□ -0.67
CHD3-203ENST00000380358 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 CLDN34H7C241 214 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 MMP9P14780 707 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 C1QL3Q5VWW1 255 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PTOV1Q86YD1 416 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 MMP26Q9NRE1 261 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 NALCNQ8IZF0 1738 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 SFT2D2O95562 160 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 CLDN20P56880 219 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 TEX101Q9BY14 249 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 NUBPLQ8TB37 319 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 ZG16BQ96DA0 208 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 TMEM56-RWDD3S4R434 201 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 OTOFQ9HC10 1997 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 CACNA1SQ13698 1873 aa10.89□□□□□ -0.67
CHD3-203ENST00000380358 HSPB2A8KAH6 182 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 TMEM33P57088 247 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 ERVFRD-1P60508 538 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 HSPB2Q16082 182 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 DUXBA0A1W2PPF3 345 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 KBTBD11O94819 623 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 HIST1H1BP16401 226 aaKnown RBP10.88□□□□□ -0.67
CHD3-203ENST00000380358 ST3GAL2Q16842 350 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 SF3B6Q9Y3B4 125 aaKnown RBP10.88□□□□□ -0.67
CHD3-203ENST00000380358 MROH1Q8NDA8 1641 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 DLK1P80370 383 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 ATP1A1-AS1Q5TC04 95 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 GPR82Q96P67 336 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 RBFOX3A6NFN3 312 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 B4DEV8 164 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 LCN2P80188 198 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 OR5AU1Q8NGC0 362 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 OR1P1Q8NH06 330 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 SLC35B3Q9H1N7 401 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 ISG15P05161 165 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 CELA2AP08217 269 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 CTLA4P16410 223 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 MALP21145 153 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 OR2V2Q96R30 315 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 HMX2A2RU54 273 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
CHD3-203ENST00000380358 RBM11P57052 281 aaKnown RBP10.88□□□□□ -0.67
CHD3-203ENST00000380358 DHRS2Q13268 280 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 GPHA2Q96T91 129 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 FAM60AQ9NP50 221 aa10.88□□□□□ -0.67
CHD3-203ENST00000380358 TMEM229AB2RXF0 380 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms