RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 ADAT1Q9BUB4 502 aaKnown RBP12.62□□□□□ -0.39
PRNP-201ENST00000379440 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 GOLT1BQ9Y3E0 138 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 J3QW42 95 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 CDIPTO14735 213 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 PHF1O43189 567 aaPredicted RBP12.62□□□□□ -0.39
PRNP-201ENST00000379440 TNFSF13O75888 250 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 NBL1P41271 181 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 OR8G1Q15617 311 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
PRNP-201ENST00000379440 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 CNTNAP3BQ96NU0 1288 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 TP53RKQ96S44 253 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 PIGMQ9H3S5 423 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 PLSCR4Q9NRQ2 329 aa12.62□□□□□ -0.39
PRNP-201ENST00000379440 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 WDR1O75083 606 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 IGKV3-15P01624 115 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 RAB5CP51148 216 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 PKIAP61925 76 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 LIAT1Q6ZQX7 453 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 KLF14Q8TD94 323 aaPredicted RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 SYT3Q9BQG1 590 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 TRDCB7Z8K6 153 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 DEGS1O15121 323 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 KLK10O43240 276 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 CNOT4O95628 575 aaKnown RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 TK1P04183 234 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 GRPP07492 148 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 ZNF154Q13106 437 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 PRDM13Q9H4Q3 707 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 BARX1Q9HBU1 254 aaPredicted RBP12.61□□□□□ -0.39
PRNP-201ENST00000379440 FZR1Q9UM11 496 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
PRNP-201ENST00000379440 INTS1Q8N201 2190 aaKnown RBP12.6□□□□□ -0.39
PRNP-201ENST00000379440 GTF3C1Q12789 2109 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 TRAV39A0A0B4J263 110 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 PET100P0DJ07 73 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRNP-201ENST00000379440 SPIN3Q5JUX0 258 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 OR2A2Q6IF42 318 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 Q6P435 159 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 SPNS3Q6ZMD2 512 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
PRNP-201ENST00000379440 LINC00596Q86U02 117 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 PHYHIPLQ96FC7 376 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 C18orf12Q96KH6 178 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 SUCNR1Q9BXA5 334 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 TUBD1Q9UJT1 453 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 LRP5LA4QPB2 252 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 COLCA2A8K830 154 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 IQCF6A8MYZ5 107 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 SIRPB1O00241 398 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 DIRAS3O95661 229 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 IGHV2-5P01817 119 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 NQO2P16083 231 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 HIST1H1BP16401 226 aaKnown RBP12.6□□□□□ -0.39
PRNP-201ENST00000379440 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
PRNP-201ENST00000379440 PYY3Q5JQD4 70 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 SIRT7Q9NRC8 400 aa12.6□□□□□ -0.39
PRNP-201ENST00000379440 KIR2DS1A0A191URI9 304 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 MPPED1O15442 326 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 CECR9P0C854 216 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 HKR1P10072 659 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 KIR2DS1Q14954 304 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 IGFL3Q6UXB1 125 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 FAM122AQ96E09 287 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
PRNP-201ENST00000379440 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 CGAP01215 116 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 CLINT1Q14677 625 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 PCSK4Q6UW60 755 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 TBC1D26Q86UD7 250 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 GAPTQ8N292 157 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
PRNP-201ENST00000379440 BOLLQ8N9W6 283 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms