RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 M0R233 179 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 PHF1O43189 567 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-206ENST00000376724 TNFSF12O43508 249 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 CYB5R3P00387 301 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-206ENST00000376724 IFNA7P01567 189 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 RRASP10301 218 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 CD80P33681 288 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 GLIPR1P48060 266 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 TMEM187Q14656 261 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 OPCMLQ14982 345 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 CA5BP1Q8WTZ4 195 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 COQ2Q96H96 371 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 CABLES2Q9BTV7 478 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 MFFQ9GZY8 342 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 SHARPINQ9H0F6 387 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
TRIM40-206ENST00000376724 NDRG3Q9UGV2 375 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 OR2W1Q9Y3N9 320 aa10.84□□□□□ -0.67
TRIM40-206ENST00000376724 GPR31O00270 319 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 MPPED1O15442 326 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 MPC2O95563 127 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 CFHR2P36980 270 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 KCNJ3P48549 501 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 SLC35E4Q6ICL7 350 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 MEX3BQ6ZN04 569 aaKnown RBP10.83□□□□□ -0.68
TRIM40-206ENST00000376724 TMUB2Q71RG4 321 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 TBC1D26Q86UD7 250 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 TGIF2LYQ8IUE0 185 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 H1FOOQ8IZA3 346 aaPredicted RBP10.83□□□□□ -0.68
TRIM40-206ENST00000376724 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 MRGPRDQ8TDS7 321 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 RNASE6Q93091 150 aaKnown RBP10.83□□□□□ -0.68
TRIM40-206ENST00000376724 FAM122AQ96E09 287 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 GALNT14Q96FL9 552 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 NMES1Q9C002 83 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 ARL6Q9H0F7 186 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 RNF7Q9UBF6 113 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 RBM7Q9Y580 266 aaKnown RBP10.83□□□□□ -0.68
TRIM40-206ENST00000376724 COL6A6A6NMZ7 2263 aa10.83□□□□□ -0.68
TRIM40-206ENST00000376724 C3orf85A0A1B0GTC6 90 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 SHISA9B4DS77 424 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 KCNAB3O43448 404 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 LHBP01229 141 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 PSMB6P28072 239 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 CEACAM6P40199 344 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 GATA4P43694 442 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 CYCSP99999 105 aaKnown RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 HMGN3Q15651 99 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 LDLRAD3Q86YD5 345 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 DEFB108BQ8NET1 73 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 OR1L1Q8NH94 360 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 RBPMSQ93062 196 aaKnown RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 DNTTIP1Q9H147 329 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 PPP1R3CQ9UQK1 317 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 KIAA2026Q5HYC2 2103 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 NBEAQ8NFP9 2946 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 SMG1Q96Q15 3661 aaKnown RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 OOEPA6NGQ2 149 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 POM121CA8CG34 1229 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 C17orf100A8MU93 164 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 VSTM5A8MXK1 200 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 C12orf77C9JDV5 145 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 IFNA21P01568 189 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 C4BPBP20851 252 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 S100A11P31949 105 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 TLE1Q04724 770 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 IAH1Q2TAA2 248 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 GGNBP1Q5YKI7 109 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 LYZL2Q7Z4W2 148 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 FOXRED2Q8IWF2 684 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 DMRTC2Q8IXT2 367 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 CMTM1Q8IZ96 169 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 DCTN5Q9BTE1 182 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 SUCNR1Q9BXA5 334 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 PARP12Q9H0J9 701 aaKnown RBP10.82□□□□□ -0.68
TRIM40-206ENST00000376724 UBQLN2Q9UHD9 624 aa10.82□□□□□ -0.68
TRIM40-206ENST00000376724 CACNA1DQ01668 2161 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 NBASA2RRP1 2371 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 E7EQL1 145 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 ZNF737O75373 536 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 PLAUP00749 431 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 CD3EP07766 207 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 IL2RGP31785 369 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 S100A10P60903 97 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
TRIM40-206ENST00000376724 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
TRIM40-206ENST00000376724 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 FAM90A1Q86YD7 464 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 FAM185AQ8N0U4 392 aa10.81□□□□□ -0.68
TRIM40-206ENST00000376724 OR10V1Q8NGI7 309 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms