RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 DANCRP0C864 163 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 CAMLGP49069 296 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 CEBPGP53567 150 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 UCP2P55851 309 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
MSH5-202ENST00000375740 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 C5orf24Q7Z6I8 188 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 ZNF610Q8N9Z0 462 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 NANOS1Q8WY41 292 aaKnown RBP11.93□□□□□ -0.5
MSH5-202ENST00000375740 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 GP6Q9HCN6 339 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 DUSP1P28562 367 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 ELOBQ15370 118 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 HAGHQ16775 308 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
MSH5-202ENST00000375740 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
MSH5-202ENST00000375740 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
MSH5-202ENST00000375740 A0A1W2PR80 420 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 TCAPO15273 167 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 PKIAP61925 76 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 CCL20P78556 96 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 OR2T2Q6IF00 324 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 OR5L1Q8NGL2 311 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
MSH5-202ENST00000375740 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 MEMO1Q9Y316 297 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 CACNA1HO95180 2353 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 AADACP22760 399 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 GCNT2Q8N0V5 402 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 TMEM68Q96MH6 324 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 MPC1Q9Y5U8 109 aa11.92□□□□□ -0.5
MSH5-202ENST00000375740 HSPB6O14558 160 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 IFNA21P01568 189 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 PRH1P02810 166 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 CELA3BP08861 270 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 PET100P0DJ07 73 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 GLI4P10075 376 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 ASCL1P50553 236 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 TMEM187Q14656 261 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 C21orf62-AS1Q17RA5 79 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 C4orf17Q53FE4 359 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 MYPOPQ86VE0 399 aaPredicted RBP11.91□□□□□ -0.5
MSH5-202ENST00000375740 OR11L1Q8NGX0 322 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 PRRX2Q99811 253 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 SLC2A9Q9NRM0 540 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 H0YL77 283 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 IGHG3P01860 377 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
MSH5-202ENST00000375740 IGHV1-2P23083 117 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 CA6P23280 308 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
MSH5-202ENST00000375740 HSD17B11Q8NBQ5 300 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 RAB39BQ96DA2 213 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 ABHD14AQ9BUJ0 271 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 Q9N2K0 584 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 CLCF1Q9UBD9 225 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 TTC28Q96AY4 2481 aa11.91□□□□□ -0.5
MSH5-202ENST00000375740 OR5H1A6NKK0 313 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 PPP1R2P9O14990 202 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 DEDDO75618 318 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 UCP3P55916 312 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 HERV-K104P61576 105 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 RNASE11Q8TAA1 199 aaKnown RBP11.9□□□□□ -0.5
MSH5-202ENST00000375740 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
MSH5-202ENST00000375740 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 TSTD3H0UI37 97 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 PHOX2AO14813 284 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 CYB5BO43169 146 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 NAPSAO96009 420 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 SCTP09683 121 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 TAGLN2P37802 199 aaKnown RBP11.9□□□□□ -0.5
MSH5-202ENST00000375740 GNG3P63215 75 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 OR8G1Q15617 311 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 TBC1D28Q2M2D7 210 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 IGFL2Q6UWQ7 119 aa11.9□□□□□ -0.5
MSH5-202ENST00000375740 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms